RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ATF6P18850 670 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 SOAT1P35610 550 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 RPS9P46781 194 aaKnown RBP12.93□□□□□ -0.34
PTCH1-212ENST00000546744 MVKQ03426 396 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 SCRN3Q0VDG4 424 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 CBWD6Q4V339 395 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 USP39Q53GS9 565 aaKnown RBP12.93□□□□□ -0.34
PTCH1-212ENST00000546744 ZRANB3Q5FWF4 1079 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 CBWD3Q5JTY5 395 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 CBWD5Q5RIA9 395 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 PAGE2Q7Z2X7 111 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 C16orf62Q7Z3J2 963 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 BRSK2Q8IWQ3 736 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 PEX5LQ8IYB4 626 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 DCP1BQ8IZD4 617 aaKnown RBP12.93□□□□□ -0.34
PTCH1-212ENST00000546744 SVOPLQ8N434 492 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 METTL6Q8TCB7 284 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 AFG1LQ8WV93 481 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 RGS10O43665 173 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 SLC2A4P14672 509 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 ITIH1P19827 911 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 ITGALP20701 1170 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 FMO1Q01740 532 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 STRIP1Q5VSL9 837 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 TXNDC11Q6PKC3 985 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 SP140LQ9H930 580 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 MRPL39Q9NYK5 338 aaKnown RBP12.93□□□□□ -0.34
PTCH1-212ENST00000546744 PCDHGC3Q9UN70 934 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 DOLKQ9UPQ8 538 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 CYP3A7-CYP3A51PA0A087WV96 503 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 AQP12BA6NM10 295 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 PLSCR1O15162 318 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 LRIG2O94898 1065 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 ITGB3P05106 788 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 ICAM1P05362 532 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 CYP3A7P24462 503 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 CCR3P51677 355 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 SLC7A2P52569 658 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 SPATA19Q7Z5L4 167 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 SLC44A2Q8IWA5 706 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-212ENST00000546744 AQP12AQ8IXF9 295 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 STK40Q8N2I9 435 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 SLITRK2Q9H156 845 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 TDRD3Q9H7E2 651 aaKnown RBP12.92□□□□□ -0.34
PTCH1-212ENST00000546744 ACTR8Q9H981 624 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 CRLS1Q9UJA2 301 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 BAIAP2Q9UQB8 552 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 ECE2O60344 883 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 EPN2O95208 641 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 KLRK1P26718 216 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 EPHX4Q8IUS5 362 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 DENND6AQ8IWF6 608 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 CACTIN-AS1Q8N1I8 211 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 RNF157Q96PX1 679 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 ADI1Q9BV57 179 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 KAT8Q9H7Z6 458 aaKnown RBP12.92□□□□□ -0.34
PTCH1-212ENST00000546744 IKZF3Q9UKT9 509 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 A0A1W2PRG6 482 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 RNF225M0QZC1 329 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-212ENST00000546744 GH1P01241 217 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 CNPP09543 421 aaKnown RBP12.92□□□□□ -0.34
PTCH1-212ENST00000546744 NR2F6P10588 404 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 THRBP10828 461 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 PCNAP12004 261 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 TCF4P15884 667 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 RBL1P28749 1068 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 ECT2LQ008S8 904 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 PPATQ06203 517 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 SPATS1Q496A3 300 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 SGO1Q5FBB7 561 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 ZNF470Q6ECI4 717 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 EEPD1Q7L9B9 569 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 HPS6Q86YV9 775 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 PLEKHO2Q8TD55 490 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 BLOC1S5Q8TDH9 187 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 HSD3B7Q9H2F3 369 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 NID2Q14112 1375 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 A0A1W2PPM1 405 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 ZNF143P52747 638 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-212ENST00000546744 AQP4P55087 323 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 TPTEP56180 551 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 VEPH1Q14D04 833 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 NDUFAF6Q330K2 333 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 LIN54Q6MZP7 749 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 NEPROQ6NW34 567 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 SYTL5Q8TDW5 730 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-212ENST00000546744 UCMAQ8WVF2 138 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 PHF21BQ96EK2 531 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 CLPTM1LQ96KA5 538 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 NODALQ96S42 347 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 FICDQ9BVA6 458 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 MTMR12Q9C0I1 747 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 DPP3Q9NY33 737 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 AHSPQ9NZD4 102 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 GRHL1Q9NZI5 618 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 SLC17A7Q9P2U7 560 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 SPEF1Q9Y4P9 236 aa12.92□□□□□ -0.34
PTCH1-212ENST00000546744 FAM240BA0A1B0GVZ2 78 aa12.91□□□□□ -0.34
PTCH1-212ENST00000546744 CST1P01037 141 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms