RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 KRT38O76015 456 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 UBOX5O94941 541 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 AHSGP02765 367 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 SLC2A3P11169 496 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 RHOQP17081 205 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 ARNTP27540 789 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 SERPINB4P48594 390 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 ZNF235Q14590 738 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 LBRQ14739 615 aaKnown RBP12.12□□□□□ -0.47
CCDC38-202ENST00000546386 ZNF470Q6ECI4 717 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 MSANTD2Q6P1R3 559 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 ZNF449Q6P9G9 518 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 CCDC121Q6ZUS5 278 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 PIGWQ7Z7B1 504 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 MFSD6LQ8IWD5 586 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 RIBC1Q8N443 379 aaPredicted RBP12.12□□□□□ -0.47
CCDC38-202ENST00000546386 TMEM199Q8N511 208 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 C12orf76Q8N812 135 aaPredicted RBP12.12□□□□□ -0.47
CCDC38-202ENST00000546386 RIN3Q8TB24 985 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 CENPTQ96BT3 561 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 TMEM237Q96Q45 408 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 IL12RB2Q99665 862 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 TMEM248Q9NWD8 314 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 ZNF212Q9UDV6 495 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 TRHDEQ9UKU6 1024 aa12.12□□□□□ -0.47
CCDC38-202ENST00000546386 DOCK4Q8N1I0 1966 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 ABHD14A-ACY1A0A1B0GW23 586 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 PRPF4O43172 522 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC38-202ENST00000546386 ITM2AO43736 263 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 C8AP07357 584 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 ZDHHC11BP0C7U3 371 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 SERINC3Q13530 473 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 SIRPB2Q5JXA9 342 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 CNSTQ6PJW8 725 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 BBS7Q8IWZ6 715 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 APCDD1Q8J025 514 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 ARHGAP18Q8N392 663 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 EFHBQ8N7U6 833 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 NAT16Q8N8M0 369 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 DDI1Q8WTU0 396 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 RMDN1Q96DB5 314 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 APOPT1Q96IL0 206 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 C1orf74Q96LT6 269 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 TRIM62Q9BVG3 475 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 FAM96AQ9H5X1 160 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 ZDHHC4Q9NPG8 344 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 SNX15Q9NRS6 342 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 FGBP02675 491 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 CTNNB1P35222 781 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 SLC11A2P49281 568 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 CDKN1CP49918 316 aaPredicted RBP12.11□□□□□ -0.47
CCDC38-202ENST00000546386 GNA12Q03113 381 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 VEPH1Q14D04 833 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 NAPEPLDQ6IQ20 393 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 TTC7BQ86TV6 843 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 TMEM135Q86UB9 458 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 CEP97Q8IW35 865 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 SCML4Q8N228 414 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 UMODL1-AS1Q8N2C9 162 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 FIBCD1Q8N539 461 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 CDKL2Q92772 493 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 SGSM3Q96HU1 749 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 TNKS2Q9H2K2 1166 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 ARMCX1Q9P291 453 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 PRKAG2Q9UGJ0 569 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 USP15Q9Y4E8 981 aaPredicted RBP12.11□□□□□ -0.47
CCDC38-202ENST00000546386 PCDHB12Q9Y5F1 795 aa12.11□□□□□ -0.47
CCDC38-202ENST00000546386 ANTXRLA6NF34 631 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 TK2O00142 265 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 SMAD6O43541 496 aaKnown RBP12.1□□□□□ -0.47
CCDC38-202ENST00000546386 HSPA1AP0DMV8 641 aaKnown RBP12.1□□□□□ -0.47
CCDC38-202ENST00000546386 HSPA1BP0DMV9 641 aaKnown RBP12.1□□□□□ -0.47
CCDC38-202ENST00000546386 HOXC13P31276 330 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 ETV4P43268 484 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 RENBPP51606 427 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 EPHB3P54753 998 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 COG7P83436 770 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 MPP3Q13368 585 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 PDK4Q16654 411 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 POM121L1PQ3SYA9 428 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 RBM20Q5T481 1227 aaKnown RBP12.1□□□□□ -0.47
CCDC38-202ENST00000546386 VWA5B1Q5TIE3 1220 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 C6orf89Q6UWU4 347 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 NUDCD3Q8IVD9 361 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 C10orf107Q8IVU9 208 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 RNF168Q8IYW5 571 aaPredicted RBP12.1□□□□□ -0.47
CCDC38-202ENST00000546386 ANKLE1Q8NAG6 615 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 ADAMTS19Q8TE59 1207 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 HDAC10Q969S8 669 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 TBATAQ96M53 351 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 TLE6Q9H808 572 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 RC3H2Q9HBD1 1191 aaKnown RBP12.1□□□□□ -0.47
CCDC38-202ENST00000546386 CFAP97Q9P2B7 532 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 MARCH4Q9P2E8 410 aaPredicted RBP12.1□□□□□ -0.47
CCDC38-202ENST00000546386 VPS28Q9UK41 221 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 EMCNQ9ULC0 261 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 SMG5Q9UPR3 1016 aaKnown RBP12.1□□□□□ -0.47
CCDC38-202ENST00000546386 PLLPQ9Y342 182 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms