RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 EFL1Q7Z2Z2 1120 aaKnown RBP16.99■□□□□ 0.31
CPSF7-225ENST00000545934 TFAP2DQ7Z6R9 452 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 CLEC14AQ86T13 490 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 TPCN2Q8NHX9 752 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 FEM1CQ96JP0 617 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 HEPHQ9BQS7 1158 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 BOCQ9BWV1 1114 aa16.99■□□□□ 0.31
CPSF7-225ENST00000545934 CXorf51AA0A1B0GTR3 108 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 GTPBP10A4D1E9 387 aaKnown RBP16.98■□□□□ 0.31
CPSF7-225ENST00000545934 ENDOD1O94919 500 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 F9P00740 461 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 C6P13671 934 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 OR1E1P30953 314 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 CDH5P33151 784 aaPredicted RBP16.98■□□□□ 0.31
CPSF7-225ENST00000545934 CLCN1P35523 988 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 SULT1E1P49888 294 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 CCNHP51946 323 aaPredicted RBP16.98■□□□□ 0.31
CPSF7-225ENST00000545934 PDX1P52945 283 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 PTK2Q05397 1052 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 PDE1CQ14123 709 aaPredicted RBP16.98■□□□□ 0.31
CPSF7-225ENST00000545934 SLC25A52Q3SY17 297 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 CARD16Q5EG05 197 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 PERM1Q5SV97 790 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 GBP6Q6ZN66 633 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 RBM44Q6ZP01 1051 aaKnown RBP16.98■□□□□ 0.31
CPSF7-225ENST00000545934 PLPP6Q8IY26 295 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 TBCBQ99426 244 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 SIX2Q9NPC8 291 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 TMEM51Q9NW97 253 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 PNMA8BQ9ULN7 279 aaPredicted RBP16.98■□□□□ 0.31
CPSF7-225ENST00000545934 STAP1Q9ULZ2 295 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 PAXBP1Q9Y5B6 917 aa16.98■□□□□ 0.31
CPSF7-225ENST00000545934 CPED1A4D0V7 1026 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 PMS2P1A4D2B8 440 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 FPGTO14772 594 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 CASC3O15234 703 aaKnown RBP16.97■□□□□ 0.31
CPSF7-225ENST00000545934 TSPAN6O43657 245 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 JUNDP17535 347 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 PON1P27169 355 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 RBMS1P29558 406 aaKnown RBP16.97■□□□□ 0.31
CPSF7-225ENST00000545934 SCNN1AP37088 669 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 MLLT3P42568 568 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-225ENST00000545934 ABL2P42684 1182 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 GABRB2P47870 512 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 DEUP1Q05D60 604 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 DEFB133Q30KQ1 61 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 SLC47A2Q86VL8 602 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 DENND6BQ8NEG7 585 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 RAB7BQ96AH8 199 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 ISG20Q96AZ6 181 aaKnown RBP16.97■□□□□ 0.31
CPSF7-225ENST00000545934 CCDC97Q96F63 343 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-225ENST00000545934 MED8Q96G25 268 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 TBATAQ96M53 351 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 HAPLN3Q96S86 360 aa16.97■□□□□ 0.31
CPSF7-225ENST00000545934 IGLON5A6NGN9 336 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 CYSRT1A8MQ03 144 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 FOXN3O00409 490 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-225ENST00000545934 BIN1O00499 593 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 FGFR1OPO95684 399 aaKnown RBP16.96■□□□□ 0.31
CPSF7-225ENST00000545934 GNA12Q03113 381 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 DRAP1Q14919 205 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-225ENST00000545934 NR0B2Q15466 257 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 TRNP1Q6NT89 227 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 DPY19L2P1Q6NXN4 242 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 SLC35F3Q8IY50 421 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 LMX1AQ8TE12 382 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 BTN2A2Q8WVV5 523 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 CENPTQ96BT3 561 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 SPON2Q9BUD6 331 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.96■□□□□ 0.31
CPSF7-225ENST00000545934 ZYG11BQ9C0D3 744 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 TCEAL2Q9H3H9 227 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-225ENST00000545934 SYNCQ9H7C4 482 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 ATP13A1Q9HD20 1204 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 PLCB1Q9NQ66 1216 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 PPARGC1AQ9UBK2 798 aaKnown RBP16.96■□□□□ 0.31
CPSF7-225ENST00000545934 GGT7Q9UJ14 662 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 FCF1Q9Y324 198 aaKnown RBP16.96■□□□□ 0.31
CPSF7-225ENST00000545934 ACTL7AQ9Y615 435 aa16.96■□□□□ 0.31
CPSF7-225ENST00000545934 C16orf96A6NNT2 1141 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 GCATO75600 419 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 KRT9P35527 623 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 FLT3P36888 993 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 RNASE9P60153 205 aaKnown RBP16.95■□□□□ 0.3
CPSF7-225ENST00000545934 CLN3Q13286 438 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 SGCGQ13326 291 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 EXOC3L4Q17RC7 722 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 C6orf132Q5T0Z8 1188 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 KIAA1614Q5VZ46 1190 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 CRTC1Q6UUV9 634 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 IRF2BP1Q8IU81 584 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 FAM71AQ8IYT1 594 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 RBFAQ8N0V3 343 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 WDR36Q8NI36 951 aaKnown RBP16.95■□□□□ 0.3
CPSF7-225ENST00000545934 WDR48Q8TAF3 677 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 IL12RB2Q99665 862 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 LRRC61Q9BV99 259 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 HECAQ9UBI9 543 aaPredicted RBP16.95■□□□□ 0.3
CPSF7-225ENST00000545934 SPASTQ9UBP0 616 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 IPO11Q9UI26 975 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms