RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 DTWD2Q8NBA8 298 aa16.52■□□□□ 0.24
LIMS2-217ENST00000545738 CCDC26Q8TAB7 109 aa16.52■□□□□ 0.24
LIMS2-217ENST00000545738 ARRDC2Q8TBH0 407 aa16.52■□□□□ 0.24
LIMS2-217ENST00000545738 GRIN3AQ8TCU5 1115 aa16.52■□□□□ 0.24
LIMS2-217ENST00000545738 BRD8Q9H0E9 1235 aa16.52■□□□□ 0.24
LIMS2-217ENST00000545738 RSPH9Q9H1X1 276 aaPredicted RBP16.52■□□□□ 0.24
LIMS2-217ENST00000545738 SERGEFQ9UGK8 458 aa16.52■□□□□ 0.24
LIMS2-217ENST00000545738 TARSL2A2RTX5 802 aaKnown RBP16.51■□□□□ 0.23
LIMS2-217ENST00000545738 PLK4O00444 970 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 DLL1O00548 723 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 ZBTB24O43167 697 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-217ENST00000545738 PIGNO95427 931 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 GSRP00390 522 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 MMP2P08253 660 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 ETS1P14921 441 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 CXCL12P48061 93 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 RENBPP51606 427 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 ELAVL3Q14576 367 aaKnown RBP16.51■□□□□ 0.23
LIMS2-217ENST00000545738 ZNF235Q14590 738 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 CYP1B1Q16678 543 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 TEX44Q53QW1 395 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 HEATR6Q6AI08 1181 aaKnown RBP16.51■□□□□ 0.23
LIMS2-217ENST00000545738 ALG1LQ6GMV1 187 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 SDE2Q6IQ49 451 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 ANO7Q6IWH7 933 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 OR2T3Q8NH03 318 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 HMGB4Q8WW32 186 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 LRFN3Q9BTN0 628 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 NOD2Q9HC29 1040 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 SUN2Q9UH99 717 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 PPM1HQ9ULR3 514 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 TTLL3Q9Y4R7 772 aa16.51■□□□□ 0.23
LIMS2-217ENST00000545738 ESPNB1AK53 854 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 SYNCRIPO60506 623 aaKnown RBP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 ATG13O75143 517 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 LEFTY1O75610 366 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 C7P10643 843 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 MAGEA9P43362 315 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 SCNN1BP51168 640 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 DGKEP52429 567 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 RPS14P62263 151 aaKnown RBP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 MYLK3Q32MK0 819 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 DRICH1Q6PGQ1 229 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 ZSWIM9Q86XI8 627 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 TMPRSS6Q8IU80 811 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 CDKL3Q8IVW4 592 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 C1orf210Q8IVY1 113 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 FRMD1Q8N878 549 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 C12orf50Q8NA57 414 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 CCDC110Q8TBZ0 833 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 TEKT5Q96M29 485 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 ZDHHC6Q9H6R6 413 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 EBF1Q9UH73 591 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 KRIT1O00522 736 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 ZNF500O60304 480 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 PAPSS2O95340 614 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 ZSCAN5DPP0CG00 497 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 CHRNA3P32297 505 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 SNRPD1P62314 119 aaKnown RBP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 NSUN2Q08J23 767 aaKnown RBP eCLIP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 STARD3Q14849 445 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 ARSIQ5FYB1 569 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 RASSF3Q86WH2 238 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 PLPP6Q8IY26 295 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 AADATQ8N5Z0 425 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 TSTD1Q8NFU3 115 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 SPATA22Q8NHS9 363 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 RTP4Q96DX8 246 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 GDAP1L1Q96MZ0 367 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 SEMA3CQ99985 751 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 IER2Q9BTL4 223 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 TPSD1Q9BZJ3 242 aa16.5■□□□□ 0.23
LIMS2-217ENST00000545738 DDX47Q9H0S4 455 aaKnown RBP16.5■□□□□ 0.23
LIMS2-217ENST00000545738 CACNA1HO95180 2353 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 MID1O15344 667 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 URI1O94763 535 aaPredicted RBP16.49■□□□□ 0.23
LIMS2-217ENST00000545738 IGSF6O95976 241 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 MT-CYBP00156 380 aaPredicted RBP16.49■□□□□ 0.23
LIMS2-217ENST00000545738 NFKB1P19838 968 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 DRD3P35462 400 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 PSMD8P48556 350 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 CCR3P51677 355 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 NCEH1Q6PIU2 408 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 SRLQ86TD4 932 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 METTL3Q86U44 580 aaKnown RBP16.49■□□□□ 0.23
LIMS2-217ENST00000545738 PRPF39Q86UA1 669 aaKnown RBP16.49■□□□□ 0.23
LIMS2-217ENST00000545738 CAMK1DQ8IU85 385 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 RYBPQ8N488 228 aaPredicted RBP16.49■□□□□ 0.23
LIMS2-217ENST00000545738 PIP4K2CQ8TBX8 421 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 ARRDC3Q96B67 414 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 NUDCD1Q96RS6 583 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 IL36AQ9UHA7 158 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 SLC8A2Q9UPR5 921 aa16.49■□□□□ 0.23
LIMS2-217ENST00000545738 TRAFD1O14545 582 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 IL1BP01584 269 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 UGT2B4P06133 528 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 ITGAVP06756 1048 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 TRAF2Q12933 501 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 CST6Q15828 149 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 ANKRD20A2Q5SQ80 823 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms