RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 SKIV2L2P42285 1042 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 BRCC3P46736 316 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 OR1G1P47890 313 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ATP5OP48047 213 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 MARCKSL1P49006 195 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PSMC1P62191 440 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 NOMO3P69849 1222 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 IFI35P80217 286 aaPredicted RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 BASP1P80723 227 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ROR1Q01973 937 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PCDH1Q08174 1060 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CCDC15Q0P6D6 951 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PDIA2Q13087 525 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 GPR17Q13304 367 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 XRCC4Q13426 336 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TDGQ13569 410 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ZNF268Q14587 947 aaPredicted RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PDK2Q15119 407 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 RASA2Q15283 850 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ZNF423Q2M1K9 1284 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TSNAXIP1Q2TAA8 658 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CCDC38Q502W7 563 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 FAM133BQ5BKY9 247 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 GLRA4Q5JXX5 417 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 FAM171A1Q5VUB5 890 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 DAB2IPQ5VWQ8 1189 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TDRD10Q5VZ19 366 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PLPP4Q5VZY2 271 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 FBXW10Q5XX13 1052 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ATG16L1Q676U5 607 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TPGS2Q68CL5 300 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 RNF43Q68DV7 783 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 AADACL2Q6P093 401 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TTC27Q6P3X3 843 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 FAM171BQ6P995 826 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 DARS2Q6PI48 645 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 C6orf89Q6UWU4 347 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 SPOCD1Q6ZMY3 1216 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PDZD4Q76G19 769 aaPredicted RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PIGWQ7Z7B1 504 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TMEM150AQ86TG1 271 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 LRRTM3Q86VH5 581 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 EXOC3L1Q86VI1 746 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PALB2Q86YC2 1186 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TDRPQ86YL5 185 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TMC8Q8IU68 726 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TICAM1Q8IUC6 712 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 LRRC34Q8IZ02 419 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ZBED8Q8IZ13 594 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 MMP21Q8N119 569 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CACTIN-AS1Q8N1I8 211 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 AGGF1Q8N302 714 aaeCLIP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ALLCQ8N6M5 410 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 UBR7Q8N806 425 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 NIPA2Q8N8Q9 360 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PJA1Q8NG27 643 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 OR10T2Q8NGX3 314 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PPP1R14CQ8TAE6 165 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ZNF461Q8TAF7 563 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 GDAP1Q8TB36 358 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PIP4K2CQ8TBX8 421 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 MDM1Q8TC05 714 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ZNF398Q8TD17 642 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 FNIP1Q8TF40 1166 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 UBASH3BQ8TF42 649 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CKAP2Q8WWK9 683 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ATG4AQ8WYN0 398 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CCT6BQ92526 530 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CDKL2Q92772 493 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CASP10Q92851 521 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 STMN2Q93045 179 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 WBP1Q96G27 269 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 SENP8Q96LD8 212 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 HEXIM2Q96MH2 286 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 SLITRK1Q96PX8 696 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 LRRC37BQ96QE4 947 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CYTH2Q99418 400 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 APOL6Q9BWW8 343 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CALN1Q9BXU9 219 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TRIM55Q9BYV6 548 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 BCO2Q9BYV7 579 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TRIM4Q9C037 500 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 KLC2Q9H0B6 622 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 LHX5Q9H2C1 402 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TRABDQ9H4I3 376 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 POMKQ9H5K3 350 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 FAM96AQ9H5X1 160 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ECT2Q9H8V3 914 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ZWILCHQ9H900 591 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 PRDM16Q9HAZ2 1276 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TRPV4Q9HBA0 871 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 WDR6Q9NNW5 1121 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 SSU72Q9NP77 194 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 BATF3Q9NR55 127 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 MRPL17Q9NRX2 175 aaKnown RBP3.69□□□□□ -1.82
LINC01965-204ENST00000545549 CISHQ9NSE2 258 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 TMEM30AQ9NV96 361 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 ZDHHC7Q9NXF8 308 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 NINJ2Q9NZG7 142 aa3.69□□□□□ -1.82
LINC01965-204ENST00000545549 IL37Q9NZH6 218 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms