RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 CLDN2P57739 230 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 POLD3Q15054 466 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-210ENST00000545493 KIAA1161Q6NSJ0 714 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 SCYL2Q6P3W7 929 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 ABI3BPQ7Z7G0 1075 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 DNAAF5Q86Y56 855 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 PLPP6Q8IY26 295 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 OR2AP1Q8NGE2 309 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 MDM1Q8TC05 714 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 KLHDC7BQ96G42 594 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 CNPY3Q9BT09 278 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 KLC2Q9H0B6 622 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 GPR27Q9NS67 375 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 GGT7Q9UJ14 662 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 PCDHGA1Q9Y5H4 931 aa21.48■■□□□ 1.03
SCARB1-210ENST00000545493 ARID1BQ8NFD5 2236 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-210ENST00000545493 SMG1Q96Q15 3661 aaKnown RBP21.47■■□□□ 1.03
SCARB1-210ENST00000545493 LOC400499M0QZD8 3231 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 KDELR3O43731 214 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 AP1G1O43747 822 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 RFPL3O75679 317 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 TMCC1O94876 653 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 CCDC172P0C7W6 258 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 CLDN6P56747 220 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 CAMK2BQ13554 666 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 ATXN7L2Q5T6C5 722 aaPredicted RBP21.47■■□□□ 1.03
SCARB1-210ENST00000545493 CAVIN1Q6NZI2 390 aaKnown RBP21.47■■□□□ 1.03
SCARB1-210ENST00000545493 DCUN1D2Q6PH85 259 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 GALNT15Q8N3T1 639 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 RYBPQ8N488 228 aaPredicted RBP21.47■■□□□ 1.03
SCARB1-210ENST00000545493 TSC1Q92574 1164 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 HMCESQ96FZ2 354 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 EPAS1Q99814 870 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 FUCA2Q9BTY2 467 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 TTYH3Q9C0H2 523 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 ITM2BQ9Y287 266 aa21.47■■□□□ 1.03
SCARB1-210ENST00000545493 ANKRD62A6NC57 917 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 WASH4PA8MWX3 477 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 TMCO5BA8MYB1 307 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 RAD51BO15315 384 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 CREB3O43889 395 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 UGT2B4P06133 528 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 AIF1P55008 147 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 FBXL19Q6PCT2 694 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 KYAT3Q6YP21 454 aaKnown RBP21.46■■□□□ 1.03
SCARB1-210ENST00000545493 TMC6Q7Z403 805 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 NETO2Q8NC67 525 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 CALN1Q9BXU9 219 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 CCDC86Q9H6F5 360 aaKnown RBP21.46■■□□□ 1.03
SCARB1-210ENST00000545493 GPATCH2LQ9NWQ4 482 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 HPCAL4Q9UM19 191 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 NBEAQ8NFP9 2946 aa21.46■■□□□ 1.03
SCARB1-210ENST00000545493 FAM208BQ5VWN6 2430 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 ZFYVE26Q68DK2 2539 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 A0A1B0GTH6 734 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 C16orf96A6NNT2 1141 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 RASA4BC9J798 803 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 KRIT1O00522 736 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 RASA4O43374 803 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 SNRPD1P62314 119 aaKnown RBP21.45■■□□□ 1.02
SCARB1-210ENST00000545493 RPS21P63220 83 aaKnown RBP21.45■■□□□ 1.02
SCARB1-210ENST00000545493 MAPK8IP2Q13387 824 aaPredicted RBP21.45■■□□□ 1.02
SCARB1-210ENST00000545493 MAMLD1Q13495 774 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 ASIC2Q16515 512 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 ZNF805Q5CZA5 627 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 PLEKHA7Q6IQ23 1121 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 ZNF571Q7Z3V5 609 aaPredicted RBP21.45■■□□□ 1.02
SCARB1-210ENST00000545493 PTAR1Q7Z6K3 402 aaPredicted RBP21.45■■□□□ 1.02
SCARB1-210ENST00000545493 ZNF354CQ86Y25 554 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 LRIG1Q96JA1 1093 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 HAUS4Q9H6D7 363 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 KLHL11Q9NVR0 708 aa21.45■■□□□ 1.02
SCARB1-210ENST00000545493 A0A1W2PQC6 194 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 ZSCAN5CA6NGD5 496 aaPredicted RBP21.44■■□□□ 1.02
SCARB1-210ENST00000545493 A6NNZ2 444 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 SMTNL1A8MU46 457 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 BUB1O43683 1085 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 TNFAIP3P21580 790 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 CA9Q16790 459 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 PROX2Q3B8N5 592 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 ARFGAP1Q8N6T3 406 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 VCPIP1Q96JH7 1222 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 BMFQ96LC9 184 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 GDAP1L1Q96MZ0 367 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 NAP1L5Q96NT1 182 aaPredicted RBP21.44■■□□□ 1.02
SCARB1-210ENST00000545493 PEBP4Q96S96 227 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 OSBPL1AQ9BXW6 950 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 SLC17A9Q9BYT1 436 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 CATSPERBQ9H7T0 1116 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 UCKL1Q9NWZ5 548 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 AP4E1Q9UPM8 1137 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 APC2O95996 2303 aa21.44■■□□□ 1.02
SCARB1-210ENST00000545493 POM121BA6NF01 834 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 TRIM38O00635 465 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 FGF10O15520 208 aaPredicted RBP21.43■■□□□ 1.02
SCARB1-210ENST00000545493 PSMA2P25787 234 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 PRKCIP41743 596 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 ZNF165P49910 485 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 TPI1P60174 286 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 SERINC3Q13530 473 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms