RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 LMAN2Q12907 356 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 IFT88Q13099 833 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 SEMA5AQ13591 1074 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 POLD3Q15054 466 aaPredicted RBP7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 TTC31Q49AM3 519 aaPredicted RBP7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 MSS51Q4VC12 460 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 TEX44Q53QW1 395 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 ATAT1Q5SQI0 421 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 NAIF1Q69YI7 327 aaPredicted RBP7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 HEATR6Q6AI08 1181 aaKnown RBP7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 PARM1Q6UWI2 310 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 ZNF783Q6ZMS7 281 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 TPGS1Q6ZTW0 290 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 LRRC49Q8IUZ0 686 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 APCDD1Q8J025 514 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 MICALL1Q8N3F8 863 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 PHTF2Q8N3S3 785 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 TAB3Q8N5C8 712 aaPredicted RBP7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 ATP11CQ8NB49 1132 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 TTC16Q8NEE8 873 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 FIBINQ8TAL6 211 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 MDM1Q8TC05 714 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 PYROXD1Q8WU10 500 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 OSCP1Q8WVF1 389 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 CKAP2Q8WWK9 683 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 MYLIPQ8WY64 445 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 IRF7Q92985 503 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 BHMTQ93088 406 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 TMA16Q96EY4 203 aaKnown RBP7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 OXNAD1Q96HP4 312 aaPredicted RBP7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 DDX50Q9BQ39 737 aaKnown RBP7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 FEM1AQ9BSK4 669 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 MAGEH1Q9H213 219 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 PLAC1Q9HBJ0 212 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 ETNK1Q9HBU6 452 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 KCNK9Q9NPC2 374 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 SPHK2Q9NRA0 654 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 EURLQ9NYK6 297 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 PAK5Q9P286 719 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 IGSF9Q9P2J2 1179 aa7.12□□□□□ -1.27
HMGCS2-204ENST00000544913 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 FAM47DPA6NHR8 397 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 CHADO15335 359 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 KDELR3O43731 214 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 OPHN1O60890 802 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 ZNF821O75541 412 aaPredicted RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 SUN1O94901 812 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 JCHAINP01591 159 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 CISD3P0C7P0 127 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 CCNB1P14635 433 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 PSMB4P28070 264 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 STX2P32856 288 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 CSKP41240 450 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 GRIA1P42261 906 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 RGRP47804 291 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 VASPP50552 380 aaPredicted RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 PLK1P53350 603 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 GEMIN4P57678 1058 aaKnown RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 ACTN3Q08043 901 aaPredicted RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 IL10RBQ08334 325 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 NIPAL4Q0D2K0 466 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 ZNF177Q13360 481 aaPredicted RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 OLIG2Q13516 323 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 HTR4Q13639 388 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 DHCR24Q15392 516 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 FUT11Q495W5 492 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 MPPE1Q53F39 396 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 RNF187Q5TA31 235 aaPredicted RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 RNF219Q5W0B1 726 aaPredicted RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 TMEM215Q68D42 235 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 ALG1LQ6GMV1 187 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 OTOP3Q7RTS5 596 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 ADIPOR2Q86V24 386 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 PALM2Q8IXS6 379 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 PLCD3Q8N3E9 789 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 CCNYQ8ND76 341 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 UHMK1Q8TAS1 419 aaKnown RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 ARRDC2Q8TBH0 407 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 BPIFB1Q8TDL5 484 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 OTUB2Q96DC9 234 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 LRRC39Q96DD0 335 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 C9orf72Q96LT7 481 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 SMC6Q96SB8 1091 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 FERMT1Q9BQL6 677 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 GBA3Q9H227 469 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 LRRC4CQ9HCJ2 640 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 PSMC3IPQ9P2W1 217 aaPredicted RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 EPS15L1Q9UBC2 864 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 VPS51Q9UID3 782 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 ARHGAP42A6NI28 874 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 CCT8L1PA6NM43 557 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 F5H423 210 aaPredicted RBP7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 MTSS1O43312 755 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 BANF1O75531 89 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 MT-CO1P00395 513 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 RHOCP08134 193 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 TYRP14679 529 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 NFKB1P19838 968 aa7.11□□□□□ -1.27
HMGCS2-204ENST00000544913 CR2P20023 1033 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms