RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 THEM5Q8N1Q8 247 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 SNRNP27Q8WVK2 155 aaKnown RBP15.22■□□□□ 0.03
CHFR-223ENST00000544268 KCTD13Q8WZ19 329 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 ULBP1Q9BZM6 244 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 HBS1LQ9Y450 684 aaKnown RBP15.22■□□□□ 0.03
CHFR-223ENST00000544268 ARHGEF37A1IGU5 675 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 USP1O94782 785 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 USP17L7P0C7H9 530 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 CD1EP15812 388 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 BDNFP23560 247 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 CRHR1P34998 444 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 SLC11A1P49279 550 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 GALK1P51570 392 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 HSP90AA5PQ58FG0 334 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 SMARCD1Q96GM5 515 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 CAB39LQ9H9S4 337 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 LRRC4Q9HBW1 653 aa15.22■□□□□ 0.03
CHFR-223ENST00000544268 CAPN14A8MX76 684 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 HOXA2O43364 376 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 SNNO75324 88 aaPredicted RBP15.21■□□□□ 0.03
CHFR-223ENST00000544268 SORBS2O94875 1100 aaKnown RBP15.21■□□□□ 0.03
CHFR-223ENST00000544268 OR4Q2P0C623 313 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 TPH1P17752 444 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 VARSP26640 1264 aaKnown RBP15.21■□□□□ 0.03
CHFR-223ENST00000544268 SERPINB8P50452 374 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 TSPY1Q01534 308 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 TBL3Q12788 808 aaKnown RBP15.21■□□□□ 0.03
CHFR-223ENST00000544268 PEX6Q13608 980 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 PDK3Q15120 406 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 KLHDC10Q6PID8 442 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 STRADAQ7RTN6 431 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 PID1Q7Z2X4 250 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 MAVSQ7Z434 540 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 PLD6Q8N2A8 252 aaKnown RBP15.21■□□□□ 0.03
CHFR-223ENST00000544268 RBM15BQ8NDT2 890 aaKnown RBP15.21■□□□□ 0.03
CHFR-223ENST00000544268 LRRC39Q96DD0 335 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 NPY6RQ99463 290 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 XAB2Q9HCS7 855 aaKnown RBP15.21■□□□□ 0.03
CHFR-223ENST00000544268 MARCH5Q9NX47 278 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 TMEM216Q9P0N5 145 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 ADAM28Q9UKQ2 775 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 PLA2G4CQ9UP65 541 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 FNDC1Q4ZHG4 1894 aaPredicted RBP15.21■□□□□ 0.03
CHFR-223ENST00000544268 VWA8A3KMH1 1905 aa15.21■□□□□ 0.03
CHFR-223ENST00000544268 SDR42E2A6NKP2 422 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 NT5C1B-RDH14C9J2C7 533 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 KLF11O14901 512 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 ALDH2P05091 517 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 FGF3P11487 239 aaPredicted RBP15.21■□□□□ 0.02
CHFR-223ENST00000544268 SCNN1AP37088 669 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 IKBKEQ14164 716 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 SFT2D3Q587I9 215 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 C1orf146Q5VVC0 180 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 UGT2A3Q6UWM9 527 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 C10orf107Q8IVU9 208 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 ULK2Q8IYT8 1036 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 SIX6OS1Q8N1H7 587 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 SLC25A41Q8N5S1 370 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 POU5F2Q8N7G0 328 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 B3GALT6Q96L58 329 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 RILPQ96NA2 401 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 GPR62Q9BZJ7 368 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 DDX18Q9NVP1 670 aaKnown RBP15.21■□□□□ 0.02
CHFR-223ENST00000544268 PNPOQ9NVS9 261 aa15.21■□□□□ 0.02
CHFR-223ENST00000544268 HHLA1C9JL84 531 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 EEF2KO00418 725 aaKnown RBP15.2■□□□□ 0.02
CHFR-223ENST00000544268 OAZ2O95190 189 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 SMIM18P0DKX4 95 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 CPA3P15088 417 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 ERCC2P18074 760 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 STX3Q13277 289 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 MSLNQ13421 630 aaPredicted RBP15.2■□□□□ 0.02
CHFR-223ENST00000544268 DPYSQ14117 519 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 MMEL1Q495T6 779 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 DNAL1Q4LDG9 190 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 EFHC1Q5JVL4 640 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 LGSNQ5TDP6 509 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 MBLAC2Q68D91 279 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 LRRC8BQ6P9F7 803 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 CNKSR3Q6P9H4 555 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 DHDDSQ86SQ9 333 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 TMEM173Q86WV6 379 aaPredicted RBP15.2■□□□□ 0.02
CHFR-223ENST00000544268 AGR3Q8TD06 166 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 MFSD3Q96ES6 412 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 CELF6Q96J87 481 aaKnown RBP15.2■□□□□ 0.02
CHFR-223ENST00000544268 C7orf26Q96N11 449 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 FRMD8Q9BZ67 464 aaPredicted RBP15.2■□□□□ 0.02
CHFR-223ENST00000544268 KLHL4Q9C0H6 718 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 CSNK1G1Q9HCP0 422 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 S100A14Q9HCY8 104 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 PRDM5Q9NQX1 630 aaPredicted RBP15.2■□□□□ 0.02
CHFR-223ENST00000544268 SLC7A8Q9UHI5 535 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 DNAJC16Q9Y2G8 782 aa15.2■□□□□ 0.02
CHFR-223ENST00000544268 TRIM43BA6NCK2 446 aa15.19■□□□□ 0.02
CHFR-223ENST00000544268 PGM3O95394 542 aa15.19■□□□□ 0.02
CHFR-223ENST00000544268 TRPC1P48995 793 aa15.19■□□□□ 0.02
CHFR-223ENST00000544268 IRF9Q00978 393 aa15.19■□□□□ 0.02
CHFR-223ENST00000544268 ZBTB17Q13105 803 aa15.19■□□□□ 0.02
CHFR-223ENST00000544268 PCLAFQ15004 111 aa15.19■□□□□ 0.02
CHFR-223ENST00000544268 ANKRD20A4Q4UJ75 823 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms