RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 P3H1Q32P28 736 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 RABL6Q3YEC7 729 aaPredicted RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 RBM20Q5T481 1227 aaKnown RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 FAM173BQ6P4H8 233 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 B3GNT6Q6ZMB0 384 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 NEK10Q6ZWH5 1172 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 HEATR3Q7Z4Q2 680 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PATL1Q86TB9 770 aaKnown RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 AACSQ86V21 672 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 SPATA24Q86W54 205 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 FAM90A1Q86YD7 464 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 LURAP1LQ8IV03 231 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 ZBED8Q8IZ13 594 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 BBS5Q8N3I7 341 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 CAMKK1Q8N5S9 505 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PI4KAP1Q8N8J0 262 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PIGOQ8TEQ8 1089 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 RAPGEF5Q92565 580 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 RGMAQ96B86 450 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 GRAMD1AQ96CP6 724 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 FAM227BQ96M60 508 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PRPF18Q99633 342 aaKnown RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 FSD1Q9BTV5 496 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 TINAGL1Q9GZM7 467 aaPredicted RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 SIK2Q9H0K1 926 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 LRMDAQ9H2I8 198 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 ECT2Q9H8V3 914 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 ATAD3AQ9NVI7 634 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PLK2Q9NYY3 685 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 AIPL1Q9NZN9 384 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 DNAJB4Q9UDY4 337 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF180Q9UJW8 692 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PNMA2Q9UL42 364 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PCDHA7Q9UN72 937 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 CHMP2BQ9UQN3 213 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 NOSIPQ9Y314 301 aaKnown RBP6.06□□□□□ -1.44
XRCC4-206ENST00000542685 TIMM22Q9Y584 194 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 SQORQ9Y6N5 450 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 RREB1Q92766 1687 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 ATRNO75882 1429 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 LRP6O75581 1613 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PAPPAQ13219 1627 aa6.06□□□□□ -1.44
XRCC4-206ENST00000542685 PASKQ96RG2 1323 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ALS2Q96Q42 1657 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 DOCK2Q92608 1830 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ARHGAP10A1A4S6 786 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 NDC80O14777 642 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 TSPAN1O60635 241 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 JAK2O60674 1132 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 PEX11AO75192 247 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 PDE5AO76074 875 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 CTDNEP1O95476 244 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 OAS1P00973 400 aaKnown RBP6.05□□□□□ -1.44
XRCC4-206ENST00000542685 KRT6AP02538 564 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 FTLP02792 175 aaPredicted RBP6.05□□□□□ -1.44
XRCC4-206ENST00000542685 KRT6BP04259 564 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 CYP21A2P08686 494 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 GSTT2P0CG29 244 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 GSTT2BP0CG30 244 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF12P17014 697 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ITPKBP27987 946 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 PHBP35232 272 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 PBX1P40424 430 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 PAFAH1B1P43034 410 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 SOX10P56693 466 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 XIAPP98170 497 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 SPAG1Q07617 926 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ACVR2BQ13705 512 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 TRIM29Q14134 588 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ARL13BQ3SXY8 428 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 MCMDC2Q4G0Z9 681 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 COBLL1Q53SF7 1204 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 NDUFAF5Q5TEU4 345 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 DENND2CQ68D51 928 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 CCSAPQ6IQ19 270 aaPredicted RBP6.05□□□□□ -1.44
XRCC4-206ENST00000542685 C8orf74Q6P047 294 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 PDXDC1Q6P996 788 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 TTC23LQ6PF05 361 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 RAD9BQ6WBX8 426 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF589Q86UQ0 364 aaPredicted RBP6.05□□□□□ -1.44
XRCC4-206ENST00000542685 TTC30AQ86WT1 665 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 NELFCDQ8IXH7 590 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 KBTBD3Q8NAB2 608 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 SUN5Q8TC36 379 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 DDB2Q92466 427 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 STARD8Q92502 1023 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 MAML1Q92585 1016 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 CDKL2Q92772 493 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 FKBP10Q96AY3 582 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 SDCCAG3Q96C92 435 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 DGCR14Q96DF8 476 aaKnown RBP6.05□□□□□ -1.44
XRCC4-206ENST00000542685 SGF29Q96ES7 293 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 CCDC43Q96MW1 224 aaKnown RBP6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF317Q96PQ6 595 aaPredicted RBP6.05□□□□□ -1.44
XRCC4-206ENST00000542685 MMS19Q96T76 1030 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 DESI2Q9BSY9 194 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 AMBRA1Q9C0C7 1298 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ZCWPW1Q9H0M4 648 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 GBA3Q9H227 469 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 TPK1Q9H3S4 243 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms