RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 NSUN2Q08J23 767 aaKnown RBP eCLIP9.38□□□□□ -0.91
LDHA-220ENST00000542179 ARMC3Q5W041 872 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 NAPEPLDQ6IQ20 393 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 RETSATQ6NUM9 610 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 TPGS1Q6ZTW0 290 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 PRPF39Q86UA1 669 aaKnown RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 ZNF354CQ86Y25 554 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 TMEM25Q86YD3 366 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 CCNJLQ8IV13 435 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 PGBD5Q8N414 524 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 ATP11CQ8NB49 1132 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 ARRDC2Q8TBH0 407 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 BPIFB1Q8TDL5 484 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 PYROXD1Q8WU10 500 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 RSPRY1Q96DX4 576 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 OXNAD1Q96HP4 312 aaPredicted RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 SIGLEC10Q96LC7 697 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 C9orf72Q96LT7 481 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 RIPOR3Q96MK2 946 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 LRRC3BQ96PB8 259 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 MGME1Q9BQP7 344 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 NAT9Q9BTE0 207 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 C2orf49Q9BVC5 232 aaPredicted RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 ROPN1BQ9BZX4 212 aaPredicted RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 POLR1EQ9GZS1 481 aaKnown RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 LINC00597Q9H2U6 94 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 TTYH1Q9H313 450 aaPredicted RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 ROPN1Q9HAT0 212 aaPredicted RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 LRRC4CQ9HCJ2 640 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 MED4Q9NPJ6 270 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 DNAJC17Q9NVM6 304 aaKnown RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 UBA2Q9UBT2 640 aaPredicted RBP9.38□□□□□ -0.91
LDHA-220ENST00000542179 VPS28Q9UK41 221 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 CDH7Q9ULB5 785 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 PLAAQ9Y263 795 aa9.38□□□□□ -0.91
LDHA-220ENST00000542179 CHD9Q3L8U1 2897 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 A0A087WUV0 522 aaPredicted RBP9.37□□□□□ -0.91
LDHA-220ENST00000542179 MAGEB16A2A368 324 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 SDR42E2A6NKP2 422 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 CBX4O00257 560 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 TBX10O75333 385 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 AVILO75366 819 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 SYF2O95926 243 aaKnown RBP9.37□□□□□ -0.91
LDHA-220ENST00000542179 CD160O95971 181 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 EPOP01588 193 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 MMP2P08253 660 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 CR2P20023 1033 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 FCARP24071 287 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 PHBP35232 272 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 ADRA1AP35348 466 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 LTBRP36941 435 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 VIPR2P41587 438 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 ELK3P41970 407 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 GRIA1P42261 906 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 MTHFRP42898 656 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 ZNF844Q08AG5 666 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 NIPAL4Q0D2K0 466 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 LMAN2Q12907 356 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 DMC1Q14565 340 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 ZNF235Q14590 738 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 STAT4Q14765 748 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 GRIN2CQ14957 1233 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 FASTKD3Q14CZ7 662 aaKnown RBP9.37□□□□□ -0.91
LDHA-220ENST00000542179 CYTH1Q15438 398 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 EML3Q32P44 896 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 PLEKHG6Q3KR16 790 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 BBS9Q3SYG4 887 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 RALGPS1Q5JS13 557 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 LY6G5CQ5SRR4 150 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 SYCP2LQ5T4T6 812 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 KDELC1Q6UW63 502 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 RANBP10Q6VN20 620 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 CYS1Q717R9 158 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 GET4Q7L5D6 327 aaPredicted RBP9.37□□□□□ -0.91
LDHA-220ENST00000542179 KIAA0907Q7Z7F0 614 aaPredicted RBP9.37□□□□□ -0.91
LDHA-220ENST00000542179 PALM2Q8IXS6 379 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 AGGF1Q8N302 714 aaeCLIP9.37□□□□□ -0.91
LDHA-220ENST00000542179 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.37□□□□□ -0.91
LDHA-220ENST00000542179 FBXO36Q8NEA4 188 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 TTC16Q8NEE8 873 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 WFDC5Q8TCV5 224 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 MSLNLQ96KJ4 702 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 RUFY1Q96T51 708 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 EBNA1BP2Q99848 306 aaKnown RBP9.37□□□□□ -0.91
LDHA-220ENST00000542179 WDR83Q9BRX9 315 aaKnown RBP9.37□□□□□ -0.91
LDHA-220ENST00000542179 APOL5Q9BWW9 433 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 BBS2Q9BXC9 721 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 ARNT2Q9HBZ2 717 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 NT5MQ9NPB1 228 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 ABCB8Q9NUT2 735 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 DUS2Q9NX74 493 aaKnown RBP9.37□□□□□ -0.91
LDHA-220ENST00000542179 FETUBQ9UGM5 382 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 FBXO10Q9UK96 956 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 CLEC4EQ9ULY5 219 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 WNT6Q9Y6F9 365 aa9.37□□□□□ -0.91
LDHA-220ENST00000542179 HEPACAM2A8MVW5 462 aa9.36□□□□□ -0.91
LDHA-220ENST00000542179 MUSKO15146 869 aa9.36□□□□□ -0.91
LDHA-220ENST00000542179 HOXC11O43248 304 aaPredicted RBP9.36□□□□□ -0.91
LDHA-220ENST00000542179 ACSL3O95573 720 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms