RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 MCPH1Q8NEM0 835 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 ELP5Q8TE02 316 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 MVB12BQ9H7P6 319 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 WDR6Q9NNW5 1121 aaKnown RBP6.37□□□□□ -1.39
YBX3-210ENST00000540975 RIC8AQ9NPQ8 531 aa6.37□□□□□ -1.39
YBX3-210ENST00000540975 SRPRBQ9Y5M8 271 aaKnown RBP6.37□□□□□ -1.39
YBX3-210ENST00000540975 ASAP2O43150 1006 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 TSPAN3O60637 253 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 CHRM4P08173 479 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 HSD3B1P14060 373 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 NAGAP17050 411 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 ARSFP54793 590 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 SLC18A2Q05940 514 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 TBL3Q12788 808 aaKnown RBP6.36□□□□□ -1.39
YBX3-210ENST00000540975 TDRD12Q587J7 1177 aaKnown RBP6.36□□□□□ -1.39
YBX3-210ENST00000540975 WDR45BQ5MNZ6 344 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 SPATA2LQ8IUW3 424 aaPredicted RBP6.36□□□□□ -1.39
YBX3-210ENST00000540975 ANKRD18AQ8IVF6 992 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 DNAAF1Q8NEP3 725 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 PHF21BQ96EK2 531 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 CD180Q99467 661 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.36□□□□□ -1.39
YBX3-210ENST00000540975 NPFFR1Q9GZQ6 430 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 LMAN2LQ9H0V9 348 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 TAOK3Q9H2K8 898 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 LRP12Q9Y561 859 aa6.36□□□□□ -1.39
YBX3-210ENST00000540975 C4orf47A7E2U8 309 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 CKMT1AP12532 417 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 ZNF585BQ52M93 769 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 BBS12Q6ZW61 710 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 PRSS45Q7RTY3 260 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 ZMIZ2Q8NF64 920 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 NUDCD2Q8WVJ2 157 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 MEIS3Q99687 375 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 MSTO1Q9BUK6 570 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 SEZ6LQ9BYH1 1024 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 ENTPD7Q9NQZ7 604 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 SELENONQ9NZV5 590 aa6.35□□□□□ -1.39
YBX3-210ENST00000540975 SLC25A17O43808 307 aa6.34□□□□□ -1.39
YBX3-210ENST00000540975 CENPAP49450 140 aa6.34□□□□□ -1.39
YBX3-210ENST00000540975 NUDT6P53370 316 aa6.34□□□□□ -1.39
YBX3-210ENST00000540975 MYBPC2Q14324 1141 aa6.34□□□□□ -1.39
YBX3-210ENST00000540975 MAP3K21Q5TCX8 1036 aa6.34□□□□□ -1.39
YBX3-210ENST00000540975 IL20RBQ6UXL0 311 aa6.34□□□□□ -1.39
YBX3-210ENST00000540975 PATL1Q86TB9 770 aaKnown RBP6.34□□□□□ -1.39
YBX3-210ENST00000540975 MIGA1Q8NAN2 632 aa6.34□□□□□ -1.39
YBX3-210ENST00000540975 TBC1D22AQ8WUA7 517 aa6.34□□□□□ -1.39
YBX3-210ENST00000540975 RAB40AQ8WXH6 277 aa6.34□□□□□ -1.39
YBX3-210ENST00000540975 CNOT9Q92600 299 aaKnown RBP6.34□□□□□ -1.39
YBX3-210ENST00000540975 C17orf113A0A1B0GUU1 675 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 EIF3FO00303 357 aaPredicted RBP6.33□□□□□ -1.4
YBX3-210ENST00000540975 CHL1O00533 1208 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 ITM2AO43736 263 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 PRSS2P07478 247 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 CTPS1P17812 591 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 UBE3AQ05086 875 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 LPIN1Q14693 890 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 NAA25Q14CX7 972 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 SHBQ15464 509 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 PLEKHO1Q53GL0 409 aaPredicted RBP6.33□□□□□ -1.4
YBX3-210ENST00000540975 KLHL22Q53GT1 634 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 CHD1LQ86WJ1 897 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 CPOQ8IVL8 374 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 ADHFE1Q8IWW8 467 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 CLIP4Q8N3C7 705 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 CPXM2Q8N436 756 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 GPT2Q8TD30 523 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 TMEM170AQ8WVE7 144 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 HERVK_113Q902F9 699 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 MED30Q96HR3 178 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 MROH8Q9H579 483 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 ALKBH4Q9NXW9 302 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.33□□□□□ -1.4
YBX3-210ENST00000540975 DGKBQ9Y6T7 804 aa6.33□□□□□ -1.4
YBX3-210ENST00000540975 PER2O15055 1255 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 DCTDP32321 178 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 TTKP33981 857 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 AMTP48728 403 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 CCR5P51681 352 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 DSCR9P59020 149 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 ADORA2A-AS1P86434 159 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 CHRNDQ07001 517 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 FAM27E3Q08E93 113 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 TRAF2Q12933 501 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 CAPSQ13938 189 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 ATG16L1Q676U5 607 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.32□□□□□ -1.4
YBX3-210ENST00000540975 NEXN-AS1Q8NBZ9 246 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 LSM14AQ8ND56 463 aaKnown RBP6.32□□□□□ -1.4
YBX3-210ENST00000540975 OR14A16Q8NHC5 309 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 GDPD5Q8WTR4 605 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 SCLT1Q96NL6 688 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 YME1L1Q96TA2 773 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 PHF7Q9BWX1 381 aaPredicted RBP6.32□□□□□ -1.4
YBX3-210ENST00000540975 SLC32A1Q9H598 525 aa6.32□□□□□ -1.4
YBX3-210ENST00000540975 ADGRF5Q8IZF2 1346 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 KDM4EB2RXH2 506 aaPredicted RBP6.31□□□□□ -1.4
YBX3-210ENST00000540975 CEP104O60308 925 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 LIFRP42702 1097 aa6.31□□□□□ -1.4
YBX3-210ENST00000540975 DHX8Q14562 1220 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms