RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 IL36AQ9UHA7 158 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 SARDHQ9UL12 918 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 PPM1HQ9ULR3 514 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 PYCARDQ9ULZ3 195 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 SCML1Q9UN30 329 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 CYP8B1Q9UNU6 501 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 VPS9D1Q9Y2B5 631 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 HEY1Q9Y5J3 304 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.09□□□□□ -1.271e-6■■■■□ 21.7
LPCAT3-209ENST00000540060 WASF2Q9Y6W5 498 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 SCN8AQ9UQD0 1980 aa7.09□□□□□ -1.27
LPCAT3-209ENST00000540060 NUMA1Q14980 2115 aa7.09□□□□□ -1.28
LPCAT3-209ENST00000540060 DMXL1Q9Y485 3027 aa7.09□□□□□ -1.28
LPCAT3-209ENST00000540060 ZNF292O60281 2723 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 RALGAPA1Q6GYQ0 2036 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 MYLKQ15746 1914 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 PROB1E7EW31 1015 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 C1QTNF3-AMACRE9PGA6 284 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 APOC4-APOC2K7ER74 178 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 PPP1R12AO14974 1030 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 MUSKO15146 869 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 MID1O15344 667 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 ZBTB24O43167 697 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 RNASEH1O60930 286 aaKnown RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 LEFTY1O75610 366 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 IGSF6O95976 241 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 IL1BP01584 269 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 APOC2P02655 101 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 PRNPP04156 253 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 ACADMP11310 421 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 MX2P20592 715 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 C5AR1P21730 350 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 BCKDHBP21953 392 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 CCNCP24863 283 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 CHRNA3P32297 505 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 SLC8A1P32418 973 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 DRD3P35462 400 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 RECQLP46063 649 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 RGRP47804 291 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 NR2C2P49116 596 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 DNA2P51530 1060 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 SNRPD1P62314 119 aaKnown RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 ZNF33AQ06730 810 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 ZNF211Q13398 564 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 ZNF235Q14590 738 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 LBRQ14739 615 aaKnown RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 PRKD1Q15139 912 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 LLGL1Q15334 1064 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 USP39Q53GS9 565 aaKnown RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 ATXN7L2Q5T6C5 722 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 KAZNQ674X7 775 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 TIGD7Q6NT04 549 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 USP30Q70CQ3 517 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 KBTBD6Q86V97 674 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 PGBD5Q8N414 524 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 TEX26Q8N6G2 289 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 TSEN2Q8NCE0 465 aaKnown RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 TMIEQ8NEW7 156 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 OR6K2Q8NGY2 324 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 PIP4K2CQ8TBX8 421 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 LRRN4Q8WUT4 740 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 UBE2Q2Q8WVN8 375 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 HAUS1Q96CS2 278 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 PSKH2Q96QS6 385 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 LGMNQ99538 433 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 HEPHQ9BQS7 1158 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 CINPQ9BW66 212 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 HEMGNQ9BXL5 484 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 TLR10Q9BXR5 811 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 OSBPL8Q9BZF1 889 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 ZDHHC6Q9H6R6 413 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 ITM2CQ9NQX7 267 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 SAE1Q9UBE0 346 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 HECAQ9UBI9 543 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 SEPT3Q9UH03 358 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 MBD1Q9UIS9 605 aaPredicted RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 FZD4Q9ULV1 537 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 SMG5Q9UPR3 1016 aaKnown RBP7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 INVSQ9Y283 1065 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 DOCK9Q9BZ29 2069 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 PCDH15Q96QU1 1955 aa7.08□□□□□ -1.28
LPCAT3-209ENST00000540060 ABCA7Q8IZY2 2146 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 TMEM131Q92545 1883 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 ZNF106Q9H2Y7 1883 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 A0A1W2PP55 124 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 C10orf142B7Z368 130 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 KPNA3O00505 521 aaPredicted RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 KRIT1O00522 736 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 MATN3O15232 486 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 GJB3O75712 270 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 RNASEH2AO75792 299 aaKnown RBP7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 WFS1O76024 890 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 PIGNO95427 931 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 CR2P20023 1033 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 ITGB7P26010 798 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 CD6P30203 668 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 GKP32189 559 aa7.07□□□□□ -1.28
LPCAT3-209ENST00000540060 ACSL1P33121 698 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms