RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 DENND6BQ8NEG7 585 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 SLC30A5Q8TAD4 765 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 ARHGEF2Q92974 986 aaKnown RBP15.56■□□□□ 0.08
UBE3B-211ENST00000539843 NTAN1Q96AB6 310 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 EPAS1Q99814 870 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 ABCG4Q9H172 646 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 CATSPERBQ9H7T0 1116 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 ZFR2Q9UPR6 939 aaKnown RBP15.56■□□□□ 0.08
UBE3B-211ENST00000539843 PLXNB3Q9ULL4 1909 aa15.56■□□□□ 0.08
UBE3B-211ENST00000539843 ZFYVE26Q68DK2 2539 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 GOLGA4Q13439 2230 aaKnown RBP15.55■□□□□ 0.08
UBE3B-211ENST00000539843 TP53BP1Q12888 1972 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-211ENST00000539843 C16orf96A6NNT2 1141 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 BUB1O43683 1085 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 LRIG2O94898 1065 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 POP4O95707 220 aaKnown RBP15.55■□□□□ 0.08
UBE3B-211ENST00000539843 PAK4O96013 591 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-211ENST00000539843 ACVRL1P37023 503 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 THOP1P52888 689 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 AIF1P55008 147 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 GSCP56915 257 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-211ENST00000539843 JAM2P57087 298 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 MYL5Q02045 173 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 PTK2BQ14289 1009 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 RTP5Q14D33 572 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 ACAP1Q15027 740 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 SCYL2Q6P3W7 929 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 TMC6Q7Z403 805 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 PHLDB2Q86SQ0 1253 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 SLC25A45Q8N413 288 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 C3orf20Q8ND61 904 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 GPT2Q8TD30 523 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 BTN2A2Q8WVV5 523 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 RFFLQ8WZ73 363 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 GLMNQ92990 594 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 DEPDC7Q96QD5 511 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 NCAPGQ9BPX3 1015 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 ZNF212Q9UDV6 495 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 APC2O95996 2303 aa15.55■□□□□ 0.08
UBE3B-211ENST00000539843 TRIM38O00635 465 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 SCAMP1O15126 338 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 MT-CO3P00414 261 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 UGT2B4P06133 528 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 GP1BAP07359 652 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 CKMT1AP12532 417 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 EPHB2P29323 1055 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 KLK7P49862 253 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 COPB1P53618 953 aaKnown RBP15.54■□□□□ 0.08
UBE3B-211ENST00000539843 RHOAP61586 193 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 UBXN1Q04323 297 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 COL9A2Q14055 689 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-211ENST00000539843 PDE1CQ14123 709 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-211ENST00000539843 STX1AQ16623 288 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 CLEC16AQ2KHT3 1053 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 CFAP58Q5T655 872 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 MANEALQ5VSG8 457 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 DCUN1D2Q6PH85 259 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 NLRP14Q86W24 1093 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 PHF13Q86YI8 300 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-211ENST00000539843 OR6K2Q8NGY2 324 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 CXorf40AQ8TE69 158 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 ASB12Q8WXK4 309 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 LENG8Q96PV6 779 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-211ENST00000539843 FANCLQ9NW38 375 aa15.54■□□□□ 0.08
UBE3B-211ENST00000539843 SPTY2D1-AS1A0A0U1RR47 76 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 SIGLEC16A6NMB1 481 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 LGALS16A8MUM7 142 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 TOR1BO14657 336 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 KDELR3O43731 214 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 ZNF821O75541 412 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 CSF2P04141 144 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 UNGP13051 313 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 NME1P15531 152 aaKnown RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 CHRNB2P17787 502 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 RPIAP49247 311 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 HDAC4P56524 1084 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 CLDN6P56747 220 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 YBEYP58557 167 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 INSM1Q01101 510 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 GRM3Q14832 879 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 MYLK3Q32MK0 819 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 PARP15Q460N3 678 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 ZCCHC8Q6NZY4 707 aaKnown RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 GDPD4Q6W3E5 623 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 KDM7AQ6ZMT4 941 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 TTC7BQ86TV6 843 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 LSMEM2Q8N112 164 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 CCDC185Q8N715 623 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 RTL3Q8N8U3 475 aaKnown RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 DCBLD1Q8N8Z6 715 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 JOSD2Q8TAC2 188 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 CENPIQ92674 756 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 FGF11Q92914 225 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 APOLD1Q96LR9 279 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 IL12RB2Q99665 862 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 NAT10Q9H0A0 1025 aaKnown RBP15.53■□□□□ 0.08
UBE3B-211ENST00000539843 UCKL1Q9NWZ5 548 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 SPASTQ9UBP0 616 aa15.53■□□□□ 0.08
UBE3B-211ENST00000539843 CSNK1G3Q9Y6M4 447 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms