RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 RANBP9Q96S59 729 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 SEMA3CQ99985 751 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 CPEB1Q9BZB8 566 aaKnown RBP11.95□□□□□ -0.5
VTN-202ENST00000539746 SMG9Q9H0W8 520 aaKnown RBP11.95□□□□□ -0.5
VTN-202ENST00000539746 NOL6Q9H6R4 1146 aaKnown RBP11.95□□□□□ -0.5
VTN-202ENST00000539746 VPS37BQ9H9H4 285 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 KCTD5Q9NXV2 234 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 SENP1Q9P0U3 644 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 PRKAG3Q9UGI9 489 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 SLC24A2Q9UI40 661 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 RIMKLBQ9ULI2 386 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 MFHAS1Q9Y4C4 1052 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 MAD1L1Q9Y6D9 718 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 FAM169AQ9Y6X4 670 aa11.95□□□□□ -0.5
VTN-202ENST00000539746 HELZP42694 1942 aaKnown RBP11.94□□□□□ -0.5
VTN-202ENST00000539746 C2orf81A6NN90 581 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 GOLGA8KD6RF30 607 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 ANHXE9PGG2 379 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 J3KR12 359 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 MAN2B1O00754 1011 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 LINC01565O15544 149 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 CDH16O75309 829 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 TCEA3O75764 348 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 PAPSS2O95340 614 aaPredicted RBP11.94□□□□□ -0.5
VTN-202ENST00000539746 NDST3O95803 873 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 PRNPP04156 253 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 HLA-DQB2P05538 268 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 ADRA1DP25100 572 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 ACVRL1P37023 503 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 HADHAP40939 763 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 TNFRSF4P43489 277 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 GRIA4P48058 902 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 ZBTB17Q13105 803 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 RASA2Q15283 850 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 SKIDA1Q1XH10 827 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 LEXMQ3ZCV2 418 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 FAM46CQ5VWP2 391 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 MBLAC2Q68D91 279 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 BRAT1Q6PJG6 821 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 KIAA0907Q7Z7F0 614 aaPredicted RBP11.94□□□□□ -0.5
VTN-202ENST00000539746 ARFGAP2Q8N6H7 521 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 OR2AP1Q8NGE2 309 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 EBNA1BP2Q99848 306 aaKnown RBP11.94□□□□□ -0.5
VTN-202ENST00000539746 TMEM109Q9BVC6 243 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 CIPCQ9C0C6 399 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 CDH19Q9H159 772 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 POMKQ9H5K3 350 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 NDFIP2Q9NV92 336 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 MRPS17Q9Y2R5 130 aaKnown RBP11.94□□□□□ -0.5
VTN-202ENST00000539746 OR51B4Q9Y5P0 310 aa11.94□□□□□ -0.5
VTN-202ENST00000539746 CEP290O15078 2479 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
VTN-202ENST00000539746 A0A0D9SEW6 157 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 EDDM13A0A1B0GTR0 161 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 FAM237BA0A1B0GVD1 139 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 TBC1D3BA6NDS4 549 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 RIPK2O43353 540 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 ATP9BO43861 1147 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 TULP3O75386 442 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 USP1O94782 785 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 METTL18O95568 372 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 ETS1P14921 441 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 DRD1P21728 446 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 KCNA5P22460 613 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 XPAP23025 273 aaPredicted RBP11.93□□□□□ -0.5
VTN-202ENST00000539746 ECHS1P30084 290 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 GDI1P31150 447 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 HSD17B3P37058 310 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 VIPR2P41587 438 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 CD86P42081 329 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 SERPINB9P50453 376 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 SCNN1BP51168 640 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 PTPN5P54829 565 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 WNT3AP56704 352 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 ZXDBP98169 803 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 SLC10A7Q0GE19 358 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 GRSF1Q12849 480 aaKnown RBP eCLIP11.93□□□□□ -0.5
VTN-202ENST00000539746 STARD3Q14849 445 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 ACCSLQ4AC99 568 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 AARS2Q5JTZ9 985 aaKnown RBP11.93□□□□□ -0.5
VTN-202ENST00000539746 ARMC12Q5T9G4 340 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 PDPK2PQ6A1A2 396 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 VITQ6UXI7 678 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 USP45Q70EL2 814 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 SRLQ86TD4 932 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 SH2D3CQ8N5H7 860 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 IPMKQ8NFU5 416 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 GSDMBQ8TAX9 411 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.93□□□□□ -0.52e-8■■■□□ 14.6
VTN-202ENST00000539746 MTBPQ96DY7 904 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 SHDQ96IW2 340 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 APOL5Q9BWW9 433 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 CASS4Q9NQ75 786 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 DYRK4Q9NR20 520 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 ELOVL2Q9NXB9 296 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 ANAPC1Q9H1A4 1944 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 OBSL1O75147 1896 aa11.93□□□□□ -0.5
VTN-202ENST00000539746 EXOC1LA0A1B0GW35 172 aa11.92□□□□□ -0.5
VTN-202ENST00000539746 HMGB1P1B2RPK0 211 aaPredicted RBP11.92□□□□□ -0.5
VTN-202ENST00000539746 C1QTNF3-AMACRE9PGA6 284 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms