RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 FAM124AQ86V42 546 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 HDDC3Q8N4P3 179 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 AADATQ8N5Z0 425 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 TEX26Q8N6G2 289 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 TMIEQ8NEW7 156 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 VOPP1Q96AW1 172 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 SPACA7Q96KW9 195 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 PSKH2Q96QS6 385 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 SERGEFQ9UGK8 458 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 SCML1Q9UN30 329 aa12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 TNRC6BQ9UPQ9 1833 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-207ENST00000539631 TTC24A2A3L6 582 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 APOC4-APOC2K7ER74 178 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 KPNA3O00505 521 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 KCNK3O14649 394 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 ENC1O14682 589 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 GJB3O75712 270 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 TJP3O95049 919 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 POP4O95707 220 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 IGLV3-19P01714 112 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 APOC2P02655 101 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 DRD3P35462 400 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 NBL1P41271 181 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 MMP13P45452 471 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 MAXP61244 160 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 HNRNPDQ14103 355 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 SIM2Q14190 667 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 NOMO1Q15155 1222 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 TTC31Q49AM3 519 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 FAM46CQ5VWP2 391 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 PRR23BQ6ZRT6 265 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 CEP68Q76N32 757 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 BZW1Q7L1Q6 419 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 SRLQ86TD4 932 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 ZC3H18Q86VM9 953 aaKnown RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 C17orf53Q8N3J3 647 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 GANCQ8TET4 914 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 FATE1Q969F0 183 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 ARRDC3Q96B67 414 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 ZNF419Q96HQ0 510 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 OMDQ99983 421 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 FAM118BQ9BPY3 351 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 NEUROG2Q9H2A3 272 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 NT5MQ9NPB1 228 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 RBM22Q9NW64 420 aaKnown RBP eCLIP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 FBXL12Q9NXK8 326 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 WSB2Q9NYS7 404 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 NCKAP1Q9Y2A7 1128 aa12.89□□□□□ -0.35
TSPAN9-207ENST00000539631 TCRBV7S2A1N4TA0A589 114 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 GOLGA6L9A6NEM1 432 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 KCNK1O00180 336 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 KIF5CO60282 957 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 RNASEH2AO75792 299 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 PIGNO95427 931 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 JCHAINP01591 159 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 ATP1A1P05023 1023 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 UGT2B4P06133 528 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 CCNB1P14635 433 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 CR2P20023 1033 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 CD6P30203 668 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 OXTRP30559 389 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 ACSL1P33121 698 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 CSNK1DP48730 415 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 SCNN1BP51168 640 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 RENBPP51606 427 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 OTUD4Q01804 1114 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 NHLH1Q02575 133 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 RAD51Q06609 339 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 ZNF33AQ06730 810 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 NSUN2Q08J23 767 aaKnown RBP eCLIP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 CNTN1Q12860 1018 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 ZBTB17Q13105 803 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 KLF1Q13351 362 aaPredicted RBP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 PRKD1Q15139 912 aaPredicted RBP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 GDPD4Q6W3E5 623 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 USP30Q70CQ3 517 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 KBTBD6Q86V97 674 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 BBS5Q8N3I7 341 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 DEFB119Q8N690 84 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 ACTL9Q8TC94 416 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 TFB1MQ8WVM0 346 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 TOE1Q96GM8 510 aaKnown RBP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 NSMCE3Q96MG7 304 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 IL12RB2Q99665 862 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 MGME1Q9BQP7 344 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 CEP41Q9BYV8 373 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 DUSP15Q9H1R2 295 aaPredicted RBP12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 CARD9Q9H257 536 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 EPC1Q9H2F5 836 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 C10orf88Q9H8K7 445 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 SEPT10Q9P0V9 454 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 JRKLQ9Y4A0 524 aa12.88□□□□□ -0.35
TSPAN9-207ENST00000539631 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 HACD1B0YJ81 288 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 H7C0C1 242 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 MAP3K13O43283 966 aa12.87□□□□□ -0.35
TSPAN9-207ENST00000539631 NDUFS2O75306 463 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms