RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 UCMAQ8WVF2 138 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 TOP1MTQ969P6 601 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 GRAMD1AQ96CP6 724 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 TMA16Q96EY4 203 aaKnown RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF670Q9BS34 389 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 REPIN1Q9BWE0 567 aaKnown RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 BRD8Q9H0E9 1235 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 RNF38Q9H0F5 515 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 MYLK2Q9H1R3 596 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 MTMR10Q9NXD2 777 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 WHRNQ9P202 907 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 CCDC22O60826 627 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 TIMP1P01033 207 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 RHOCP08134 193 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 MX2P20592 715 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ATP6V1C1P21283 382 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 CTBP1Q13363 440 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 OASLQ15646 514 aaKnown RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 GEN1Q17RS7 908 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 MMEL1Q495T6 779 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 FBXO48Q5FWF7 155 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 XKR4Q5GH76 650 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 MARC1Q5VT66 337 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 IZUMO2Q6UXV1 221 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 GRASPQ7Z6J2 395 aaPredicted RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 MTDHQ86UE4 582 aaKnown RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 KREMEN2Q8NCW0 462 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF461Q8TAF7 563 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 GRIN3AQ8TCU5 1115 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF778Q96MU6 729 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 TBC1D10AQ9BXI6 508 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 TNKS2Q9H2K2 1166 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 CAB39LQ9H9S4 337 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 IARS2Q9NSE4 1012 aaKnown RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 SYBUQ9NX95 663 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 CLIC5Q9NZA1 410 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 PHTF1Q9UMS5 762 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 A0A1B0GVG6 124 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 OR6C75A6NL08 312 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 B2RBV5 119 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 M0QZQ0 153 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 TRIM24O15164 1050 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 DGKIO75912 1065 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 S100BP04271 92 aaPredicted RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ITGAVP06756 1048 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 LINGO3P0C6S8 592 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 CTPS1P17812 591 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ITGB6P18564 788 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 WASP42768 502 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 CCDC85BQ15834 202 aaPredicted RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 DPYSL2Q16555 572 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 KCTD21Q4G0X4 260 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 IRGCQ6NXR0 463 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ZCCHC23Q6ZST2 131 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 DDX53Q86TM3 631 aaKnown RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 GALNT15Q8N3T1 639 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 FITM2Q8N6M3 262 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 TRIML2Q8N7C3 387 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 MOCOSQ96EN8 888 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 FAM111AQ96PZ2 611 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 SEMA3CQ99985 751 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 SIKE1Q9BRV8 207 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ADAM7Q9H2U9 754 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 WDR6Q9NNW5 1121 aaKnown RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 PCDH12Q9NPG4 1184 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 RABL2AQ9UBK7 228 aaPredicted RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 DNMT3LQ9UJW3 386 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 SLC39A10Q9ULF5 831 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 MGAMO43451 1857 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ANK1P16157 1881 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 FAM47DPA6NHR8 397 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 SYN3O14994 580 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 COCHO43405 550 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 KRT36O76013 467 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 STAU1O95793 577 aaKnown RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 GLUD1P00367 558 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 PYGBP11216 843 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 TYMPP19971 482 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 PBX2P40425 430 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 AP2B1P63010 937 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 PRAMEP78395 509 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ENPEPQ07075 957 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 ATXN7L2Q5T6C5 722 aaPredicted RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 GPR158Q5T848 1215 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 RNF219Q5W0B1 726 aaPredicted RBP8.34□□□□□ -1.07
ABCA4-207ENST00000536513 VSTM1Q6UX27 236 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 PHC3Q8NDX5 983 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 APBB2Q92870 758 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 WBP2Q969T9 261 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 TCEAL4Q96EI5 215 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 MYEOVQ96EZ4 313 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 MPP4Q96JB8 637 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 CHKBQ9Y259 395 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 CRYL1Q9Y2S2 319 aa8.34□□□□□ -1.07
ABCA4-207ENST00000536513 SRRM3A6NNA2 597 aaPredicted RBP8.33□□□□□ -1.08
ABCA4-207ENST00000536513 TGM5O43548 720 aa8.33□□□□□ -1.08
ABCA4-207ENST00000536513 UNC5CO95185 931 aa8.33□□□□□ -1.08
ABCA4-207ENST00000536513 ZWINTO95229 277 aa8.33□□□□□ -1.08
ABCA4-207ENST00000536513 C1RP00736 705 aa8.33□□□□□ -1.08
ABCA4-207ENST00000536513 EPCAMP16422 314 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms