RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 C1QTNF7Q9BXJ2 289 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 TDRD1Q9BXT4 1180 aaKnown RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 TRIM8Q9BZR9 551 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 GPR88Q9GZN0 384 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 LHPPQ9H008 270 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 PRO3102Q9H379 93 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 EXD2Q9NVH0 621 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 SMOXQ9NWM0 555 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 DUS2Q9NX74 493 aaKnown RBP3.78□□□□□ -1.81
MCF2-210ENST00000536274 STMN3Q9NZ72 180 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 TEKT2Q9UIF3 430 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 DNPEPQ9ULA0 475 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 CDH7Q9ULB5 785 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 VANGL2Q9ULK5 521 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 ANKRD6Q9Y2G4 727 aa3.78□□□□□ -1.81
MCF2-210ENST00000536274 POLR2AP24928 1970 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 CLDN25C9JDP6 229 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 E7ENX8 843 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 C3orf80F5H4A9 247 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SMLR1H3BR10 107 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 RAD51BO15315 384 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SLC37A4O43826 429 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 TSC22D2O75157 780 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SPAG6O75602 509 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 RFPL2O75678 378 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SGPL1O95470 568 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CFBP00751 764 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 KRT8P05787 483 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 RBP1P09455 135 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CCDC159P0C7I6 412 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 KRT3P12035 628 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ITIH1P19827 911 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 GARSP41250 739 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 ABCG1P45844 678 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ARSEP51690 589 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 HUNKP57058 714 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 GTF2IP78347 998 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 TAP1Q03518 808 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 TROAPQ12815 778 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 PTK6Q13882 451 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 PTK2BQ14289 1009 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 POLD3Q15054 466 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 FSCN1Q16658 493 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 PTCHD3Q3KNS1 767 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ZIK1Q3SY52 487 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 FAM26FQ5R3K3 315 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SUSD4Q5VX71 490 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 TMEM198Q66K66 360 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 PDPK2PQ6A1A2 396 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ZNF787Q6DD87 383 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ERAP2Q6P179 960 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 TXNDC11Q6PKC3 985 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 LAYNQ6UX15 382 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 NEK8Q86SG6 692 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SLCO6A1Q86UG4 719 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 METTL23Q86XA0 190 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 RHPN2Q8IUC4 686 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CTAGE3PQ8IX95 158 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SPARTQ8N0X7 666 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ZCCHC7Q8N3Z6 543 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 ADCY4Q8NFM4 1077 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 NDNFQ8TB73 568 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 GTF2H4Q92759 462 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SGF29Q96ES7 293 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 NPAS2Q99743 824 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 C17orf62Q9BQA9 187 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SORBS1Q9BX66 1292 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 C1QTNF6Q9BXI9 259 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 WDR55Q9H6Y2 383 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 LRRC19Q9H756 370 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 FANCFQ9NPI8 374 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ATP13A2Q9NQ11 1180 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 RPRD1BQ9NQG5 326 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 MTRRQ9UBK8 725 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ENOPH1Q9UHY7 261 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SCML1Q9UN30 329 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 DNM3Q9UQ16 869 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SLC45A1Q9Y2W3 748 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 DNMT3AQ9Y6K1 912 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 A0A0A6YYK5 440 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 TCRBV5S4A2TA0A5A2 114 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CCDC85CA6NKD9 419 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 YDJCA8MPS7 323 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CXorf49A8MYA2 514 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 CENPBD1B2RD01 187 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 B8ZZF3 427 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SYNCRIPO60506 623 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 RNGTTO60942 597 aaKnown RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 PIGNO95427 931 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 PAHP00439 452 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 PRKCBP05771 671 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 CYP2D6P10635 497 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 COX4I1P13073 169 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 ITGALP20701 1170 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 GARTP22102 1010 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 DCKP27707 260 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 TTKP33981 857 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 SOX5P35711 763 aa3.77□□□□□ -1.81
MCF2-210ENST00000536274 IL15P40933 162 aaPredicted RBP3.77□□□□□ -1.81
MCF2-210ENST00000536274 KRT6CP48668 564 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms