RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 FAM149B1Q96BN6 582 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 ARHGAP39Q9C0H5 1083 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 COQ10BQ9H8M1 238 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 PCDH9Q9HC56 1237 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 GNPTGQ9UJJ9 305 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 MANSC4A6NHS7 340 aaPredicted RBP14.17□□□□□ -0.14
LIG1-203ENST00000536218 HUS1O60921 280 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 STAU1O95793 577 aaKnown RBP14.17□□□□□ -0.14
LIG1-203ENST00000536218 IL1BP01584 269 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 ZNF182P17025 639 aaPredicted RBP14.17□□□□□ -0.14
LIG1-203ENST00000536218 CTGFP29279 349 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 NKX2-5P52952 324 aaPredicted RBP14.17□□□□□ -0.14
LIG1-203ENST00000536218 CRHR2Q13324 411 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 CARTPTQ16568 116 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 TEX44Q53QW1 395 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 IFNL1Q8IU54 200 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 CHERPQ8IWX8 916 aaKnown RBP14.17□□□□□ -0.14
LIG1-203ENST00000536218 TTC39CQ8N584 583 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 LRRC52Q8N7C0 313 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 NETO2Q8NC67 525 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 KBTBD7Q8WVZ9 684 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 NAA50Q9GZZ1 169 aaKnown RBP14.17□□□□□ -0.14
LIG1-203ENST00000536218 RSAD1Q9HA92 442 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 CLK4Q9HAZ1 481 aaKnown RBP14.17□□□□□ -0.14
LIG1-203ENST00000536218 SORCS3Q9UPU3 1222 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 ATP11BQ9Y2G3 1177 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 PCDHGA3Q9Y5H0 932 aa14.17□□□□□ -0.14
LIG1-203ENST00000536218 TCRBV9S1A1TA0A576 114 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 ELK3P41970 407 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 TAF6P49848 677 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 THOP1P52888 689 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PURAQ00577 322 aaKnown RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 DPYSL3Q14195 570 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 ZBED5Q49AG3 693 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 FAXCQ5TGI0 409 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 IGDCC3Q8IVU1 814 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PCYOX1LQ8NBM8 494 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 SMG8Q8ND04 991 aaKnown RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 KHSRPQ92945 711 aaKnown RBP eCLIP14.16□□□□□ -0.14
LIG1-203ENST00000536218 SLC2A11Q9BYW1 496 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 ERGIC3Q9Y282 383 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 DERAQ9Y315 318 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 ST14Q9Y5Y6 855 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 TMEM114B3SHH9 223 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 H3BMQ9 156 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 HAS3O00219 553 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PLOD2O00469 737 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PIRO00625 290 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 MGEA5O60502 916 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 CD4P01730 458 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 COX4I1P13073 169 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PTPN7P35236 360 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 ETFBP38117 255 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 CRYBB1P53674 252 aaPredicted RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 TPTEP56180 551 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 STILQ15468 1287 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 RGMBQ6NW40 437 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 CYP4V2Q6ZWL3 525 aaPredicted RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 CADM3Q8N126 398 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 NDUFAF2Q8N183 169 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 MAELQ96JY0 434 aaKnown RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 COG8Q96MW5 612 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 SNRNP25Q9BV90 132 aaKnown RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 SLC4A5Q9BY07 1137 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 TRPV6Q9H1D0 765 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 DHX35Q9H5Z1 703 aaKnown RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 RPF2Q9H7B2 306 aaKnown RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 OLAHQ9NV23 265 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PNPOQ9NVS9 261 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 XPO7Q9UIA9 1087 aaKnown RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 KBTBD13C9JR72 458 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 APOC4-APOC2K7ER74 178 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 KPNA4O00629 521 aaPredicted RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 APOC2P02655 101 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 ENO2P09104 434 aaPredicted RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 MYCLP1P12525 358 aaPredicted RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 SERPINB5P36952 375 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 LILRA4P59901 499 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PKDCCQ504Y2 493 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 ADGRF2Q8IZF7 708 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 TRPV1Q8NER1 839 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PIWIL2Q8TC59 973 aaKnown RBP14.16□□□□□ -0.14
LIG1-203ENST00000536218 CPT1BQ92523 772 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PCDH12Q9NPG4 1184 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 PNPLA3Q9NST1 481 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 BCAP29Q9UHQ4 241 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 ERVK-11Q9UQG0 969 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 N6AMT1Q9Y5N5 214 aa14.16□□□□□ -0.14
LIG1-203ENST00000536218 MYO1DO94832 1006 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 MX2P20592 715 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 RPL10AP62906 217 aaKnown RBP14.15□□□□□ -0.14
LIG1-203ENST00000536218 MOGQ16653 247 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 WSCD1Q658N2 575 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 PPIL6Q8IXY8 311 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 FAM156AQ8NDB6 213 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 AGR3Q8TD06 166 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 GAD1Q99259 594 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 SERPINI1Q99574 410 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 APBA2Q99767 749 aa14.15□□□□□ -0.14
LIG1-203ENST00000536218 SH3GL1Q99961 368 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms