RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LZTR1Q8N653 840 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 TRIM62Q9BVG3 475 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 CRTAC1Q9NQ79 661 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 VANGL2Q9ULK5 521 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 APOBEC2Q9Y235 224 aaKnown RBP18.2■□□□□ 0.5
RAB40C-203ENST00000535977 TRIM17Q9Y577 477 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 NRP1O14786 923 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 THP07101 528 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 PCSK1P29120 753 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 RPL9P32969 192 aaKnown RBP18.19■□□□□ 0.5
RAB40C-203ENST00000535977 MAGEA12P43365 314 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 PDAP1Q13442 181 aaKnown RBP18.19■□□□□ 0.5
RAB40C-203ENST00000535977 HPS6Q86YV9 775 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 UNC5BQ8IZJ1 945 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 C2orf69Q8N8R5 385 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 PTPN18Q99952 460 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 EBF4Q9BQW3 602 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 GBA3Q9H227 469 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 GPBP1L1Q9HC44 474 aaPredicted RBP18.19■□□□□ 0.5
RAB40C-203ENST00000535977 TSC22D4Q9Y3Q8 395 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 MYO18AQ92614 2054 aaKnown RBP18.19■□□□□ 0.5
RAB40C-203ENST00000535977 NCAM1P13591 858 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 TMED10P49755 219 aaKnown RBP18.19■□□□□ 0.5
RAB40C-203ENST00000535977 C6orf52Q5T4I8 152 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 THOC7Q6I9Y2 204 aaKnown RBP18.19■□□□□ 0.5
RAB40C-203ENST00000535977 HFE2Q6ZVN8 426 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 LPCAT2Q7L5N7 544 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 KBTBD6Q86V97 674 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 SCML4Q8N228 414 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 DHRS1Q96LJ7 313 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 RBBP8Q99708 897 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 SMOQ99835 787 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 HEPHQ9BQS7 1158 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 C20orf27Q9GZN8 174 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 TMPRSS4Q9NRS4 437 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 NSMCE4AQ9NXX6 385 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 COPG2Q9UBF2 871 aa18.19■□□□□ 0.5
RAB40C-203ENST00000535977 YJEFN3A6XGL0 299 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 CSE1LP55060 971 aaKnown RBP18.18■□□□□ 0.5
RAB40C-203ENST00000535977 GALNT2Q10471 571 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 PRPSAP1Q14558 356 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 KIAA0319Q5VV43 1072 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 KCTD11Q693B1 232 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 RSPH3Q86UC2 560 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 PQLC1Q8N2U9 271 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 OR52K1Q8NGK4 314 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 SMARCD1Q96GM5 515 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 COLEC11Q9BWP8 271 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 ARMC7Q9H6L4 198 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 DNAJC28Q9NX36 388 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 DNAJC16Q9Y2G8 782 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 F5H423 210 aaPredicted RBP18.18■□□□□ 0.5
RAB40C-203ENST00000535977 H2AFYO75367 372 aaKnown RBP18.18■□□□□ 0.5
RAB40C-203ENST00000535977 ERVK-10P10266 1014 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 CYP2B6P20813 491 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 LIMK2P53671 638 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 PCLAFQ15004 111 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 C16orf46Q6P387 395 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 DNAAF3Q8N9W5 541 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 NEURL2Q9BR09 285 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 WDCPQ9H6R7 721 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 DDIT4Q9NX09 232 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 MID2Q9UJV3 735 aa18.18■□□□□ 0.5
RAB40C-203ENST00000535977 KCNK1O00180 336 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 TIMM44O43615 452 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 CYP2C18P33260 490 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 HARS2P49590 506 aaKnown RBP18.17■□□□□ 0.5
RAB40C-203ENST00000535977 CXCR3P49682 368 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 BCAP31P51572 246 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 RPL10AP62906 217 aaKnown RBP18.17■□□□□ 0.5
RAB40C-203ENST00000535977 MRPS6P82932 125 aaKnown RBP18.17■□□□□ 0.5
RAB40C-203ENST00000535977 ZNF423Q2M1K9 1284 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 CASP10Q92851 521 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 CEP41Q9BYV8 373 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 SHCBP1LQ9BZQ2 653 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 IL22Q9GZX6 179 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 GIT1Q9Y2X7 761 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 PSAT1Q9Y617 370 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 FAM72CH0Y354 149 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 FUCA1P04066 466 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 RPLP2P05387 115 aaKnown RBP18.17■□□□□ 0.5
RAB40C-203ENST00000535977 CLCN2P51788 898 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 FAM72AQ5TYM5 149 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 FAM72DQ6L9T8 149 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 DCLRE1AQ6PJP8 1040 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 ZCCHC23Q6ZST2 131 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 LINC00523Q86TU6 105 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 FAM72BQ86X60 149 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 ACTRT2Q8TDY3 377 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 PPP1R13LQ8WUF5 828 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 ZNF669Q96BR6 464 aaPredicted RBP18.17■□□□□ 0.5
RAB40C-203ENST00000535977 PCED1BQ96HM7 432 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 ZFP42Q96MM3 310 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 NACA2Q9H009 215 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 CSNK1G1Q9HCP0 422 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 SNX15Q9NRS6 342 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 FAM105AQ9NUU6 356 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 TRPV2Q9Y5S1 764 aa18.17■□□□□ 0.5
RAB40C-203ENST00000535977 OXSR1O95747 527 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-203ENST00000535977 OCM2P0CE71 109 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms