RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CD180Q99467 661 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 ISCA1Q9BUE6 129 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 TM6SF1Q9BZW5 370 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 SLCO5A1Q9H2Y9 848 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 STN1Q9H668 368 aaKnown RBP5.39□□□□□ -1.55
PRKDC-205ENST00000535375 ALKBH4Q9NXW9 302 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 CLDN16Q9Y5I7 305 aa5.39□□□□□ -1.55
PRKDC-205ENST00000535375 IFRD1O00458 451 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-205ENST00000535375 ACOT8O14734 319 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 PAPSS2O95340 614 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-205ENST00000535375 CD72P21854 359 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 EFR3AQ14156 821 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 HNF4GQ14541 408 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 NFATC4Q14934 902 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 PLCB4Q15147 1175 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 RPE65Q16518 533 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 HLFQ16534 295 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 SLC18A3Q16572 532 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 ME3Q16798 604 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 ZNF284Q2VY69 593 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 ZNF324BQ6AW86 544 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-205ENST00000535375 FAM83HQ6ZRV2 1179 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-205ENST00000535375 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-205ENST00000535375 CHD1LQ86WJ1 897 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 OR4N2Q8NGD1 307 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 WDR6Q9NNW5 1121 aaKnown RBP5.38□□□□□ -1.55
PRKDC-205ENST00000535375 IFT80Q9P2H3 777 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-205ENST00000535375 HDAC6Q9UBN7 1215 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 LRP12Q9Y561 859 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 RAI2Q9Y5P3 530 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 CNTNAP2Q9UHC6 1331 aa5.38□□□□□ -1.55
PRKDC-205ENST00000535375 VWA3AA6NCI4 1184 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 SH2D7A6NKC9 451 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-205ENST00000535375 CHL1O00533 1208 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 ADAP00813 363 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 CHRM4P08173 479 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 CNPP09543 421 aaKnown RBP5.37□□□□□ -1.55
PRKDC-205ENST00000535375 FGF3P11487 239 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-205ENST00000535375 PLA2G2AP14555 144 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 ARSFP54793 590 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 DSCR9P59020 149 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 TBL3Q12788 808 aaKnown RBP5.37□□□□□ -1.55
PRKDC-205ENST00000535375 PPFIA1Q13136 1202 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 EDRF1Q3B7T1 1238 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 FBXO43Q4G163 708 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 DCAF6Q58WW2 860 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 NADSYN1Q6IA69 706 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 CAPRIN2Q6IMN6 1127 aaKnown RBP5.37□□□□□ -1.55
PRKDC-205ENST00000535375 NAPEPLDQ6IQ20 393 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 IL20RBQ6UXL0 311 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 LDHAL6AQ6ZMR3 332 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 ANKRD18AQ8IVF6 992 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 CNOT9Q92600 299 aaKnown RBP5.37□□□□□ -1.55
PRKDC-205ENST00000535375 RNF183Q96D59 192 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 NPFFR1Q9GZQ6 430 aa5.37□□□□□ -1.55
PRKDC-205ENST00000535375 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.37□□□□□ -1.55
PRKDC-205ENST00000535375 KCNJ13O60928 360 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 SERPINI2O75830 405 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 AMTP48728 403 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 CAPSQ13938 189 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 KEAP1Q14145 624 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 MYBPC2Q14324 1141 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 NAA25Q14CX7 972 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 C8orf82Q6P1X6 216 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-205ENST00000535375 PRSS45Q7RTY3 260 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 ZMIZ2Q8NF64 920 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 NOC3LQ8WTT2 800 aaKnown RBP5.36□□□□□ -1.55
PRKDC-205ENST00000535375 C6orf106Q9H6K1 298 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-205ENST00000535375 MVB12BQ9H7P6 319 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 CD93Q9NPY3 652 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 PROCRQ9UNN8 238 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 PCDHGB3Q9Y5G1 929 aa5.36□□□□□ -1.55
PRKDC-205ENST00000535375 TYW5A2RUC4 315 aaKnown RBP5.35□□□□□ -1.55
PRKDC-205ENST00000535375 PIP5K1CO60331 668 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 SOX30O94993 753 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 TFPIP10646 304 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 CTPS1P17812 591 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 C21orf33P30042 268 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-205ENST00000535375 SHBQ15464 509 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 TAF12Q16514 161 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 PLEKHO1Q53GL0 409 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-205ENST00000535375 CPXM2Q8N436 756 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 MCPH1Q8NEM0 835 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 GDPD5Q8WTR4 605 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 OTULINQ96BN8 352 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 TXNDC15Q96J42 360 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 SCLT1Q96NL6 688 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 TWNKQ96RR1 684 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 CTAGE1Q96RT6 745 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 MROH8Q9H579 483 aa5.35□□□□□ -1.55
PRKDC-205ENST00000535375 SPATS2LQ9NUQ6 558 aaKnown RBP5.35□□□□□ -1.55
PRKDC-205ENST00000535375 IGHV4-28A0A0C4DH34 117 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 C17orf113A0A1B0GUU1 675 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 ARHGAP10A1A4S6 786 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 EME2A4GXA9 379 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-205ENST00000535375 PRSS44E7EML9 344 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 CEP104O60308 925 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 FCGR1AP12314 374 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 MYF6P23409 242 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms