RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 PLRG1O43660 514 aaKnown RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 ZNF821O75541 412 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 MTA2O94776 668 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 PCDH8O95206 1070 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 CD160O95971 181 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 UGT2B4P06133 528 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 XPAP23025 273 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 ITGB7P26010 798 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 PI4KAP42356 2102 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 SLC1A1P43005 524 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 NEK3P51956 506 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 LIMK1P53667 647 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 NAP1L1P55209 391 aaKnown RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 C21orf59P57076 290 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 TAS2R40P59535 323 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 IL10RBQ08334 325 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 DPYSL3Q14195 570 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 ZNF235Q14590 738 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 SLC45A4Q5BKX6 768 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 AGBL4Q5VU57 503 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 DGLUCYQ7Z3D6 616 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 PRPF39Q86UA1 669 aaKnown RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 BBS5Q8N3I7 341 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 NPWQ8N729 165 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 NETO2Q8NC67 525 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 ARRDC3Q96B67 414 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 EXOC2Q96KP1 924 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 BAG1Q99933 345 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 MAK16Q9BXY0 300 aaKnown RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 HDAC8Q9BY41 377 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 ZDHHC5Q9C0B5 715 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 PREBQ9HCU5 417 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 TM9SF3Q9HD45 589 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 AASDHPPTQ9NRN7 309 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 IPO11Q9UI26 975 aaKnown RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 EPN1Q9Y6I3 576 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-227ENST00000533909 WASF2Q9Y6W5 498 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 DMXL1Q9Y485 3027 aa13.58□□□□□ -0.23
CAPN1-227ENST00000533909 TNRC6BQ9UPQ9 1833 aaKnown RBP13.58□□□□□ -0.24
CAPN1-227ENST00000533909 LRRD1A4D1F6 860 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 SOWAHDA6NJG2 315 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 NDUFA10O95299 355 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 IGHV4-34P06331 123 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 MAT2AP31153 395 aaKnown RBP13.58□□□□□ -0.24
CAPN1-227ENST00000533909 GKP32189 559 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 NUDT1P36639 197 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 CSNK1EP49674 416 aaKnown RBP13.58□□□□□ -0.24
CAPN1-227ENST00000533909 RENBPP51606 427 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 MMRN1Q13201 1228 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 RFTN1Q14699 578 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-227ENST00000533909 GRM3Q14832 879 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 ATP13A4Q4VNC1 1196 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 SETMARQ53H47 684 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-227ENST00000533909 ZNF805Q5CZA5 627 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 PIP5KL1Q5T9C9 394 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 AFMIDQ63HM1 303 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 IL27RAQ6UWB1 636 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 CPNE8Q86YQ8 564 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 ARHGAP12Q8IWW6 846 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 RHOT1Q8IXI2 618 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 TXLNBQ8N3L3 684 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 SERAC1Q96JX3 654 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 ZNF830Q96NB3 372 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-227ENST00000533909 ZNF670Q9BS34 389 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 CAPN10Q9HC96 672 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 FSCN3Q9NQT6 498 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 ETNK2Q9NVF9 386 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 HAUS2Q9NVX0 235 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 SEPT3Q9UH03 358 aa13.58□□□□□ -0.24
CAPN1-227ENST00000533909 CNOT1A5YKK6 2376 aaKnown RBP13.57□□□□□ -0.24
CAPN1-227ENST00000533909 SPTBN2O15020 2390 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 A0A1W2PPC4 97 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 C16orf96A6NNT2 1141 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 OPHN1O60890 802 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 RNGTTO60942 597 aaKnown RBP13.57□□□□□ -0.24
CAPN1-227ENST00000533909 NEBLO76041 1014 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 LCA5LO95447 670 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 KRT1P04264 644 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 CD48P09326 243 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 ADRB3P13945 408 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 PPP2CBP62714 309 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 RACK1P63244 317 aaKnown RBP13.57□□□□□ -0.24
CAPN1-227ENST00000533909 PPP2CAP67775 309 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 GRIK2Q13002 908 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 CYTH1Q15438 398 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 ANKRD20A8PQ5CZ79 823 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 NEK5Q6P3R8 708 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 MINDY1Q8N5J2 469 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 TSC1Q92574 1164 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 KLHL32Q96NJ5 620 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 ZNF599Q96NL3 588 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 ATP13A3Q9H7F0 1226 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 PDFQ9HBH1 243 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 DDX56Q9NY93 547 aaKnown RBP13.57□□□□□ -0.24
CAPN1-227ENST00000533909 DLL3Q9NYJ7 618 aa13.57□□□□□ -0.24
CAPN1-227ENST00000533909 LHX3Q9UBR4 397 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms