RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 RAMP2O60895 175 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 GJB3O75712 270 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 KCNK5O95279 499 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 IGHV4-34P06331 123 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 ADRB1P08588 477 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 CEACAM1P13688 526 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 KDELR1P24390 212 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 CETN2P41208 172 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 GRIA4P48058 902 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 PSMD8P48556 350 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 SERPINH1P50454 418 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 AFF3P51826 1226 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 YBEYP58557 167 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 ARF5P84085 180 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 CCDC15Q0P6D6 951 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 DPYSL3Q14195 570 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 POLD3Q15054 466 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 IL27RAQ6UWB1 636 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 TMCO3Q6UWJ1 677 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 Q6ZVU0 165 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 NT5DC3Q86UY8 548 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 RFX6Q8HWS3 928 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 HDDC3Q8N4P3 179 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 ZCCHC9Q8N567 271 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 MINDY1Q8N5J2 469 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 PCDH20Q8N6Y1 951 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 PIP4K2CQ8TBX8 421 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 KRT35Q92764 455 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 ARHGEF2Q92974 986 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 CELF6Q96J87 481 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 NDFIP2Q9NV92 336 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 RCOR3Q9P2K3 495 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 SARDHQ9UL12 918 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 HPCAL4Q9UM19 191 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 PACSIN2Q9UNF0 486 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 LAMA1P25391 3075 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 DOCK4Q8N1I0 1966 aa13.18□□□□□ -0.3
TRAPPC4-212ENST00000533058 NCOR2Q9Y618 2525 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 A0A1W2PPC4 97 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 GOLGA6L9A6NEM1 432 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 ZSCAN5CA6NGD5 496 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 MIF4GDA9UHW6 222 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 K7ERQ8 282 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 DFFAO00273 331 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 SMAD6O43541 496 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 LATO43561 262 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 KIF5CO60282 957 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 OPHN1O60890 802 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 ZNF821O75541 412 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 ZRANB2O95218 330 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 CD160O95971 181 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 PRNPP04156 253 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 ZNF883P0CG24 379 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 CTNNA2P26232 953 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 CHRNA3P32297 505 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 CTNNA1P35221 906 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 NUDT1P36639 197 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 MARCKSL1P49006 195 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 ARSEP51690 589 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 ADPRHP54922 357 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 RWDD2BP57060 319 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 RACK1P63244 317 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 GRIK2Q13002 908 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 DPYSQ14117 519 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 ANKRD20A8PQ5CZ79 823 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 KAZNQ674X7 775 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 C22orf39Q6P5X5 142 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 NCEH1Q6PIU2 408 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 PIP4P1Q86T03 277 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 REXO1L1PQ8IX06 675 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 RCOR2Q8IZ40 523 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 UMODL1-AS1Q8N2C9 162 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 TRIM58Q8NG06 486 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 RBM41Q96IZ5 413 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 ZNF670Q9BS34 389 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 MIR1-1HGQ9H1L0 117 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 TM9SF3Q9HD45 589 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 PCDHA3Q9Y5H8 950 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 PCDH15Q96QU1 1955 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 SPTBN2O15020 2390 aa13.17□□□□□ -0.3
TRAPPC4-212ENST00000533058 NUMA1Q14980 2115 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 ARHGAP42A6NI28 874 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 RASA4BC9J798 803 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 RASA4O43374 803 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 PLRG1O43660 514 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 KDELR3O43731 214 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 FSBPO95073 299 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 CTSLP07711 333 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 GLDCP23378 1020 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 MSNP26038 577 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 SERPINB6P35237 376 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 ACVRL1P37023 503 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 MAPK8P45983 427 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 RECQLP46063 649 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 DYNLT1P63172 113 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 HNRNPDQ14103 355 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 LLGL1Q15334 1064 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 RPS6KA1Q15418 735 aa13.16□□□□□ -0.3
TRAPPC4-212ENST00000533058 TEAD4Q15561 434 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms