RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 DPYSQ14117 519 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 KIF19Q2TAC6 998 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 MYLK3Q32MK0 819 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 AFMIDQ63HM1 303 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 PIP4P1Q86T03 277 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 LZTR1Q8N653 840 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 SERAC1Q96JX3 654 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 CCDC42Q96M95 316 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 GDAP1L1Q96MZ0 367 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 SLC6A18Q96N87 628 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 CHP1Q99653 195 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 SLC39A8Q9C0K1 460 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 NHEJ1Q9H9Q4 299 aaPredicted RBP23.35■■□□□ 1.33
CAPN1-222ENST00000532285 AASDHPPTQ9NRN7 309 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.35■■□□□ 1.33
CAPN1-222ENST00000532285 UBA2Q9UBT2 640 aaPredicted RBP23.35■■□□□ 1.33
CAPN1-222ENST00000532285 DMTF1Q9Y222 760 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 TRPM6Q9BX84 2022 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 KRIT1O00522 736 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 VILLO15195 856 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 PRAMEF11O60813 436 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 RNGTTO60942 597 aaKnown RBP23.34■■□□□ 1.33
CAPN1-222ENST00000532285 IGSF6O95976 241 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 ZNF883P0CG24 379 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 CD59P13987 128 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 CD38P28907 300 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 MAT2AP31153 395 aaKnown RBP23.34■■□□□ 1.33
CAPN1-222ENST00000532285 PAPOLAP51003 745 aaKnown RBP23.34■■□□□ 1.33
CAPN1-222ENST00000532285 C21orf59P57076 290 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 RHOAP61586 193 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 SLC25A11Q02978 314 aaKnown RBP23.34■■□□□ 1.33
CAPN1-222ENST00000532285 RAD51Q06609 339 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 HADHQ16836 314 aaKnown RBP23.34■■□□□ 1.33
CAPN1-222ENST00000532285 SETMARQ53H47 684 aaPredicted RBP23.34■■□□□ 1.33
CAPN1-222ENST00000532285 FBXL19Q6PCT2 694 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 POLNQ7Z5Q5 900 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 OR6K2Q8NGY2 324 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 OSBPL1AQ9BXW6 950 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 PACSIN1Q9BY11 444 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 LCMT1Q9UIC8 334 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 SNX11Q9Y5W9 270 aa23.34■■□□□ 1.33
CAPN1-222ENST00000532285 ADRB1P08588 477 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 TMEM253P0C7T8 217 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 ADRB3P13945 408 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 SLC45A4Q5BKX6 768 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 ZNF805Q5CZA5 627 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 ATXN7L2Q5T6C5 722 aaPredicted RBP23.33■■□□□ 1.33
CAPN1-222ENST00000532285 TXNRD3NBQ6F5E7 133 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 NAPEPLDQ6IQ20 393 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 LAYNQ6UX15 382 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 ARHGAP12Q8IWW6 846 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 DEFB124Q8NES8 71 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 IL21RQ9HBE5 538 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 PDFQ9HBH1 243 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 MFHAS1Q9Y4C4 1052 aa23.33■■□□□ 1.33
CAPN1-222ENST00000532285 J3KR12 359 aa23.32■■□□□ 1.32
CAPN1-222ENST00000532285 GIPC1O14908 333 aa23.32■■□□□ 1.32
CAPN1-222ENST00000532285 GKP32189 559 aa23.32■■□□□ 1.32
CAPN1-222ENST00000532285 CTSKP43235 329 aa23.32■■□□□ 1.32
CAPN1-222ENST00000532285 SSR1P43307 286 aaKnown RBP23.32■■□□□ 1.32
CAPN1-222ENST00000532285 CYTH1Q15438 398 aa23.32■■□□□ 1.32
CAPN1-222ENST00000532285 N4BP2L1Q5TBK1 243 aaPredicted RBP23.32■■□□□ 1.32
CAPN1-222ENST00000532285 NPWQ8N729 165 aa23.32■■□□□ 1.32
CAPN1-222ENST00000532285 TM7SF3Q9NS93 570 aa23.32■■□□□ 1.32
CAPN1-222ENST00000532285 ANKRD36A6QL64 1941 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 CABIN1Q9Y6J0 2220 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 A0A1W2PQU0 124 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 A0A1W2PR77 199 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 C16orf96A6NNT2 1141 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 DFFAO00273 331 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 AP1G1O43747 822 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 DFNA5O60443 496 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 PROSCO94903 275 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 PCDH8O95206 1070 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 WNT1P04628 370 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 UGT2B4P06133 528 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 AMPD1P23109 780 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 TMCO3Q6UWJ1 677 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 GDPD4Q6W3E5 623 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 PARS2Q7L3T8 475 aaKnown RBP23.31■■□□□ 1.32
CAPN1-222ENST00000532285 HORMAD1Q86X24 394 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 NETO2Q8NC67 525 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 RAB7BQ96AH8 199 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 CSPG4P5Q96PW8 444 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 CPEB1Q9BZB8 566 aaKnown RBP23.31■■□□□ 1.32
CAPN1-222ENST00000532285 PCDH18Q9HCL0 1135 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 SPTLC3Q9NUV7 552 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 LHX3Q9UBR4 397 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 FNDC3AQ9Y2H6 1198 aaKnown RBP23.31■■□□□ 1.32
CAPN1-222ENST00000532285 PCDHGB2Q9Y5G2 931 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 SHROOM3Q8TF72 1996 aa23.31■■□□□ 1.32
CAPN1-222ENST00000532285 NCOR2Q9Y618 2525 aa23.3■■□□□ 1.32
CAPN1-222ENST00000532285 PRAMEF26H0Y7S4 382 aa23.3■■□□□ 1.32
CAPN1-222ENST00000532285 WNT9AO14904 365 aa23.3■■□□□ 1.32
CAPN1-222ENST00000532285 HNRNPDQ14103 355 aaKnown RBP23.3■■□□□ 1.32
CAPN1-222ENST00000532285 KRT81Q14533 505 aa23.3■■□□□ 1.32
CAPN1-222ENST00000532285 STAT4Q14765 748 aa23.3■■□□□ 1.32
CAPN1-222ENST00000532285 ZNF423Q2M1K9 1284 aa23.3■■□□□ 1.32
CAPN1-222ENST00000532285 ZNF284Q2VY69 593 aa23.3■■□□□ 1.32
CAPN1-222ENST00000532285 MFSD2AQ8NA29 543 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms