RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 KRT2P35908 639 aa4.55□□□□□ -1.68
PTPRK-220ENST00000531466 ZBTB17Q13105 803 aa4.55□□□□□ -1.68
PTPRK-220ENST00000531466 WDR75Q8IWA0 830 aaKnown RBP4.55□□□□□ -1.68
PTPRK-220ENST00000531466 TBC1D22AQ8WUA7 517 aa4.55□□□□□ -1.68
PTPRK-220ENST00000531466 ATOH1Q92858 354 aaPredicted RBP4.55□□□□□ -1.68
PTPRK-220ENST00000531466 TEFMQ96QE5 360 aaKnown RBP4.55□□□□□ -1.68
PTPRK-220ENST00000531466 LRRC4Q9HBW1 653 aa4.55□□□□□ -1.68
PTPRK-220ENST00000531466 ZFP57Q9NU63 452 aa4.55□□□□□ -1.68
PTPRK-220ENST00000531466 PCDHGB2Q9Y5G2 931 aa4.55□□□□□ -1.68
PTPRK-220ENST00000531466 J3KR12 359 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 KDM4BO94953 1096 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 VNN2O95498 520 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 ATP1A1P05023 1023 aaKnown RBP4.54□□□□□ -1.68
PTPRK-220ENST00000531466 MYL3P08590 195 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 ACCSLQ4AC99 568 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 COBLL1Q53SF7 1204 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 FAM69BQ5VUD6 431 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 SLC26A9Q7LBE3 791 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 SCAIQ8N9R8 606 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 MUL1Q969V5 352 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 RIPOR3Q96MK2 946 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 EBF2Q9HAK2 575 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 DDX43Q9NXZ2 648 aaKnown RBP4.54□□□□□ -1.68
PTPRK-220ENST00000531466 HERC5Q9UII4 1024 aaKnown RBP4.54□□□□□ -1.68
PTPRK-220ENST00000531466 TCF19Q9Y242 345 aa4.54□□□□□ -1.68
PTPRK-220ENST00000531466 COL2A1P02458 1487 aaPredicted RBP4.54□□□□□ -1.68
PTPRK-220ENST00000531466 IGKV3D-15A0A087WSY6 115 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 FAM72CH0Y354 149 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 PLA2G6O60733 806 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 FGF5P12034 268 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 CDKN1AP38936 164 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 TBRG1Q3YBR2 411 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 TRIM60Q495X7 471 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 FAM72AQ5TYM5 149 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 NCAPH2Q6IBW4 605 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 FAM72DQ6L9T8 149 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 NEK10Q6ZWH5 1172 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 DPP9Q86TI2 863 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 FAM72BQ86X60 149 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 GATAD2AQ86YP4 633 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 TMC8Q8IU68 726 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 AADATQ8N5Z0 425 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 ARRDC3Q96B67 414 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 ANKRD9Q96BM1 317 aaPredicted RBP4.53□□□□□ -1.68
PTPRK-220ENST00000531466 NAA15Q9BXJ9 866 aaKnown RBP4.53□□□□□ -1.68
PTPRK-220ENST00000531466 STK33Q9BYT3 514 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 ZNF334Q9HCZ1 680 aaPredicted RBP4.53□□□□□ -1.68
PTPRK-220ENST00000531466 PTPRHQ9HD43 1115 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 KLQ9UEF7 1012 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 RCE1Q9Y256 329 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 PAM16Q9Y3D7 125 aa4.53□□□□□ -1.68
PTPRK-220ENST00000531466 A0A096LPK6 155 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 hDV102S1A0JD36 115 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 PMM2O15305 246 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 CLDN14O95500 239 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 CETPP11597 493 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 GYS1P13807 737 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 YWHAQP27348 245 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 SKIV2L2P42285 1042 aaKnown RBP4.52□□□□□ -1.69
PTPRK-220ENST00000531466 IZUMO3Q5VZ72 239 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 GALNT7Q86SF2 657 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 SLC2A12Q8TD20 617 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 TRIB2Q92519 343 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 CLPBQ9H078 707 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 MVB12BQ9H7P6 319 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 SMARCAL1Q9NZC9 954 aa4.52□□□□□ -1.69
PTPRK-220ENST00000531466 AQP12BA6NM10 295 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 APAF1O14727 1248 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 CYP4B1P13584 511 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 MARK3P27448 753 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 AVPR2P30518 371 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 GPR12P47775 334 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 AADACL2Q6P093 401 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 C19orf48Q6RUI8 117 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 KLHL24Q6TFL4 600 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 BRSK2Q8IWQ3 736 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 OR13A1Q8NGR1 328 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 OR1N1Q8NGS0 311 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 CSF3RQ99062 836 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 CXorf56Q9H5V9 222 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 CERS4Q9HA82 394 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 OR6C3Q9NZP0 311 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 ZNF711Q9Y462 761 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 SNX9Q9Y5X1 595 aa4.51□□□□□ -1.69
PTPRK-220ENST00000531466 RASA4O43374 803 aa4.5□□□□□ -1.69
PTPRK-220ENST00000531466 KIF1CO43896 1103 aaKnown RBP4.5□□□□□ -1.69
PTPRK-220ENST00000531466 CCNT1O60563 726 aaKnown RBP4.5□□□□□ -1.69
PTPRK-220ENST00000531466 CBX6O95503 412 aa4.5□□□□□ -1.69
PTPRK-220ENST00000531466 TIMP3P35625 211 aa4.5□□□□□ -1.69
PTPRK-220ENST00000531466 LINC01547P58512 204 aaPredicted RBP4.5□□□□□ -1.69
PTPRK-220ENST00000531466 FAM27E3Q08E93 113 aa4.5□□□□□ -1.69
PTPRK-220ENST00000531466 CAPSQ13938 189 aa4.5□□□□□ -1.69
PTPRK-220ENST00000531466 OR2C3Q8N628 320 aa4.5□□□□□ -1.69
PTPRK-220ENST00000531466 ZNF501Q96CX3 271 aaPredicted RBP4.5□□□□□ -1.69
PTPRK-220ENST00000531466 PIGSQ96S52 555 aa4.5□□□□□ -1.69
PTPRK-220ENST00000531466 BRD8Q9H0E9 1235 aa4.5□□□□□ -1.69
PTPRK-220ENST00000531466 WDR6Q9NNW5 1121 aaKnown RBP4.5□□□□□ -1.69
PTPRK-220ENST00000531466 DHDHQ9UQ10 334 aa4.5□□□□□ -1.69
PTPRK-220ENST00000531466 SMAD5-AS1Q9Y6J3 95 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms