RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 BBS5Q8N3I7 341 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.82□□□□□ -0.2
FDFT1-219ENST00000531249 PIP4K2CQ8TBX8 421 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 GANCQ8TET4 914 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 TFB1MQ8WVM0 346 aaKnown RBP13.82□□□□□ -0.2
FDFT1-219ENST00000531249 PRRX2Q99811 253 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 HEPHQ9BQS7 1158 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 C10orf88Q9H8K7 445 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 NT5MQ9NPB1 228 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 RBM22Q9NW64 420 aaKnown RBP eCLIP13.82□□□□□ -0.23e-10■■■□□ 18.8
FDFT1-219ENST00000531249 IL36AQ9UHA7 158 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 CYP8B1Q9UNU6 501 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 TTLL3Q9Y4R7 772 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 WASF2Q9Y6W5 498 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 SHROOM3Q8TF72 1996 aa13.82□□□□□ -0.2
FDFT1-219ENST00000531249 C1QTNF3-AMACRE9PGA6 284 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 RNF103O00237 685 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 PLK4O00444 970 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 KPNA3O00505 521 aaPredicted RBP13.81□□□□□ -0.2
FDFT1-219ENST00000531249 ALOX15BO15296 676 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 LEFTY1O75610 366 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 GJB3O75712 270 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 POP4O95707 220 aaKnown RBP13.81□□□□□ -0.2
FDFT1-219ENST00000531249 CCNB1P14635 433 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 HOXA6P31267 233 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 SLC8A1P32418 973 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 SCNN1BP51168 640 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 RENBPP51606 427 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 METAP1P53582 386 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 EIF3EP60228 445 aaKnown RBP13.81□□□□□ -0.2
FDFT1-219ENST00000531249 SRSF5Q13243 272 aaKnown RBP13.81□□□□□ -0.2
FDFT1-219ENST00000531249 KLF1Q13351 362 aaPredicted RBP13.81□□□□□ -0.2
FDFT1-219ENST00000531249 HNRNPDQ14103 355 aaKnown RBP13.81□□□□□ -0.2
FDFT1-219ENST00000531249 SRLQ86TD4 932 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 FAM124AQ86V42 546 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 PGBD5Q8N414 524 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 FAM160A2Q8N612 972 aaPredicted RBP13.81□□□□□ -0.2
FDFT1-219ENST00000531249 FRMD1Q8N878 549 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 UBXN4Q92575 508 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 MAML1Q92585 1016 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 ZNF419Q96HQ0 510 aaPredicted RBP13.81□□□□□ -0.2
FDFT1-219ENST00000531249 PSKH2Q96QS6 385 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 BRD8Q9H0E9 1235 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 ZSCAN32Q9NX65 697 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 PPM1HQ9ULR3 514 aa13.81□□□□□ -0.2
FDFT1-219ENST00000531249 R3HDM2Q9Y2K5 976 aaKnown RBP13.81□□□□□ -0.2
FDFT1-219ENST00000531249 A0A1W2PP55 124 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 CTAGE9A4FU28 777 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 PIGNO95427 931 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 ADH1BP00325 375 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 FGGP02679 453 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 PRNPP04156 253 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 HLA-DQB2P05538 268 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 UGT2B4P06133 528 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 RBP3P10745 1247 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 TPMTP51580 245 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 RAD51Q06609 339 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 ZBTB17Q13105 803 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 PRKD1Q15139 912 aaPredicted RBP13.8□□□□□ -0.2
FDFT1-219ENST00000531249 LONRF2Q1L5Z9 754 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 TTC31Q49AM3 519 aaPredicted RBP13.8□□□□□ -0.2
FDFT1-219ENST00000531249 USP39Q53GS9 565 aaKnown RBP13.8□□□□□ -0.2
FDFT1-219ENST00000531249 FAM46CQ5VWP2 391 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 DARS2Q6PI48 645 aaKnown RBP13.8□□□□□ -0.2
FDFT1-219ENST00000531249 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 HDDC3Q8N4P3 179 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 TEX26Q8N6G2 289 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 CEP112Q8N8E3 955 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 TTC13Q8NBP0 860 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 ATG4AQ8WYN0 398 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 MS4A14Q96JA4 679 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 PBKQ96KB5 322 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 QKIQ96PU8 341 aaKnown RBP eCLIP13.8□□□□□ -0.2
FDFT1-219ENST00000531249 OSBPL9Q96SU4 736 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 OMDQ99983 421 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 FAM126AQ9BYI3 521 aaPredicted RBP13.8□□□□□ -0.2
FDFT1-219ENST00000531249 PABPC3Q9H361 631 aaKnown RBP13.8□□□□□ -0.2
FDFT1-219ENST00000531249 ARGLU1Q9NWB6 273 aaPredicted RBP13.8□□□□□ -0.2
FDFT1-219ENST00000531249 FBXL12Q9NXK8 326 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 SERGEFQ9UGK8 458 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 RAPGEFL1Q9UHV5 662 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 HCN4Q9Y3Q4 1203 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 MRFAP1Q9Y605 127 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 R4GN57 208 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 WDFY4Q6ZS81 3184 aa13.8□□□□□ -0.2
FDFT1-219ENST00000531249 CCDC163A0A0D9SF12 145 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 HACD1B0YJ81 288 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 ZNF217O75362 1048 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 RNASEH2AO75792 299 aaKnown RBP13.79□□□□□ -0.2
FDFT1-219ENST00000531249 C5AR1P21730 350 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 RBL1P28749 1068 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 HSPA9P38646 679 aaKnown RBP13.79□□□□□ -0.2
FDFT1-219ENST00000531249 IFI35P80217 286 aaPredicted RBP13.79□□□□□ -0.2
FDFT1-219ENST00000531249 ZBTB16Q05516 673 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 ZNF33AQ06730 810 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 NSUN2Q08J23 767 aaKnown RBP eCLIP13.79□□□□□ -0.2
FDFT1-219ENST00000531249 XRCC4Q13426 336 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 MAP7D1Q3KQU3 841 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 SLC45A4Q5BKX6 768 aa13.79□□□□□ -0.2
FDFT1-219ENST00000531249 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms