RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 RNASEH1O60930 286 aaKnown RBP16.27■□□□□ 0.2
BRK1-201ENST00000530758 IGSF6O95976 241 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 IGLV3-19P01714 112 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 FGGP02679 453 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 PRNPP04156 253 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 CTSLP07711 333 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 RBP3P10745 1247 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 CCNHP51946 323 aaPredicted RBP16.27■□□□□ 0.2
BRK1-201ENST00000530758 EIF3EP60228 445 aaKnown RBP16.27■□□□□ 0.2
BRK1-201ENST00000530758 CSTF1Q05048 431 aaKnown RBP16.27■□□□□ 0.2
BRK1-201ENST00000530758 GRM3Q14832 879 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 CCNG2Q16589 344 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 TEX44Q53QW1 395 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 ZNF776Q68DI1 518 aaPredicted RBP16.27■□□□□ 0.2
BRK1-201ENST00000530758 ZC3H18Q86VM9 953 aaKnown RBP16.27■□□□□ 0.2
BRK1-201ENST00000530758 WDR5BQ86VZ2 330 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 CNTD1Q8N815 330 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 CHST14Q8NCH0 376 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 HCAR2Q8TDS4 363 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 COG1Q8WTW3 980 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 HTR3CQ8WXA8 447 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 HAUS1Q96CS2 278 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 SIPA1Q96FS4 1042 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 VAT1Q99536 393 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 USP29Q9HBJ7 922 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 RBM22Q9NW64 420 aaKnown RBP eCLIP16.27■□□□□ 0.2
BRK1-201ENST00000530758 IL36AQ9UHA7 158 aa16.27■□□□□ 0.2
BRK1-201ENST00000530758 R3HDM2Q9Y2K5 976 aaKnown RBP16.27■□□□□ 0.2
BRK1-201ENST00000530758 WDR87Q6ZQQ6 2873 aa16.27■□□□□ 0.19
BRK1-201ENST00000530758 ADH1BP00325 375 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 JCHAINP01591 159 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 SP9P0CG40 484 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 C5AR1P21730 350 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 MAPK8P45983 427 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 RGRP47804 291 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 RAD51Q06609 339 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 WASHC5Q12768 1159 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 FAM46CQ5VWP2 391 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 ANO7Q6IWH7 933 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 TSSK4Q6SA08 328 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 USP30Q70CQ3 517 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 SRLQ86TD4 932 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 LONP2Q86WA8 852 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 CDKL3Q8IVW4 592 aaPredicted RBP16.26■□□□□ 0.19
BRK1-201ENST00000530758 ZBTB44Q8NCP5 570 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 LRRN4Q8WUT4 740 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 HMGB4Q8WW32 186 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 SPOCK2Q92563 424 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 PRCCQ92733 491 aaPredicted RBP16.26■□□□□ 0.19
BRK1-201ENST00000530758 NKD2Q969F2 451 aaPredicted RBP16.26■□□□□ 0.19
BRK1-201ENST00000530758 TEKT5Q96M29 485 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 NUDCD1Q96RS6 583 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 TUBGCP5Q96RT8 1024 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 NAP1L3Q99457 506 aaPredicted RBP16.26■□□□□ 0.19
BRK1-201ENST00000530758 OSBPL1AQ9BXW6 950 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 TM6SF2Q9BZW4 377 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 IRF2BPLQ9H1B7 796 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 HOMER3Q9NSC5 361 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 HAUS2Q9NVX0 235 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 USP36Q9P275 1121 aaKnown RBP16.26■□□□□ 0.19
BRK1-201ENST00000530758 SARDHQ9UL12 918 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 DRG1Q9Y295 367 aaKnown RBP16.26■□□□□ 0.19
BRK1-201ENST00000530758 SAR1BQ9Y6B6 198 aa16.26■□□□□ 0.19
BRK1-201ENST00000530758 H7C0C1 242 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 KCNK1O00180 336 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 AXIN1O15169 862 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 LIASO43766 372 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 ZNF217O75362 1048 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 PTPN3P26045 913 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 RBL1P28749 1068 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 STIP1P31948 543 aaKnown RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 SLC8A1P32418 973 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 ATP5OP48047 213 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 AP1S1P61966 158 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 DMWDQ09019 674 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 SFSWAPQ12872 951 aaKnown RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 ZBTB17Q13105 803 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 ZNF235Q14590 738 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 OASLQ15646 514 aaKnown RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 CST6Q15828 149 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 LONRF2Q1L5Z9 754 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 ARSIQ5FYB1 569 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 ATXN7L2Q5T6C5 722 aaPredicted RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 HEATR6Q6AI08 1181 aaKnown RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 NCEH1Q6PIU2 408 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 CREG2Q8IUH2 290 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 MMAAQ8IVH4 418 aaKnown RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 ARRDC2Q8TBH0 407 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 PIP4K2CQ8TBX8 421 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 NSMCE3Q96MG7 304 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 ZNF641Q96N77 438 aaPredicted RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 POLR1EQ9GZS1 481 aaKnown RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 SLC6A17Q9H1V8 727 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 PABPC3Q9H361 631 aaKnown RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 ZSCAN32Q9NX65 697 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 RNF14Q9UBS8 474 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 EVLQ9UI08 416 aaPredicted RBP16.25■□□□□ 0.19
BRK1-201ENST00000530758 DNPEPQ9ULA0 475 aa16.25■□□□□ 0.19
BRK1-201ENST00000530758 CFAP69A5D8W1 941 aa16.24■□□□□ 0.19
BRK1-201ENST00000530758 C1QTNF3-AMACRE9PGA6 284 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms