RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 COQ4Q9Y3A0 265 aa11.85□□□□□ -0.51
AMBRA1-207ENST00000529553 PCDHGA3Q9Y5H0 932 aa11.85□□□□□ -0.51
AMBRA1-207ENST00000529553 SPTBN1Q01082 2364 aaKnown RBP11.85□□□□□ -0.51
AMBRA1-207ENST00000529553 TMEM110-MUSTN1A8MSY1 372 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 ZNF891A8MT65 544 aaPredicted RBP11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 RNF103O00237 685 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 TRUB2O95900 331 aaKnown RBP11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 GLB1P16278 677 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 SYT1P21579 422 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 TBXAS1P24557 533 aaPredicted RBP11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 CCR1P32246 355 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 PEX5P50542 639 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 CDH4P55283 916 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 SLC20A2Q08357 652 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 CUL4AQ13619 759 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 C5orf22Q49AR2 442 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 FHL5Q5TD97 284 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 MACC1Q6ZN28 852 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 SLITRK4Q8IW52 837 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 CEP57L1Q8IYX8 460 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 UBR7Q8N806 425 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 KYQ8NBH2 561 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 OR52K2Q8NGK3 314 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 TFAP2BQ92481 460 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 FAM149B1Q96BN6 582 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 TAAR9Q96RI9 348 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 MUC3BQ9H195 1237 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 POPDC2Q9HBU9 364 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 ZNF71Q9NQZ8 489 aaPredicted RBP11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 PNMA8BQ9ULN7 279 aaPredicted RBP11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 GPR34Q9UPC5 381 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 WASF2Q9Y6W5 498 aa11.84□□□□□ -0.51
AMBRA1-207ENST00000529553 K7ERQ8 282 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 SMAD6O43541 496 aaKnown RBP11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 AGFG2O95081 481 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 YEATS4O95619 227 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 MYL1P05976 194 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 EIF4A3P38919 411 aaKnown RBP11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 HK3P52790 923 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 YWHAZP63104 245 aaKnown RBP11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 CLPPQ16740 277 aaPredicted RBP11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 OGFOD3Q6PK18 319 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 DPY19L3Q6ZPD9 716 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 PLPP6Q8IY26 295 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 IL22RA1Q8N6P7 574 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 GPR156Q8NFN8 814 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 GRIN3AQ8TCU5 1115 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 SSC4DQ8WTU2 575 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 STK32AQ8WU08 396 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 ARHGEF26Q96DR7 871 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 ABHD17AQ96GS6 310 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 SLC45A3Q96JT2 553 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 MED15Q96RN5 788 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 PSMB7Q99436 277 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 HEPHQ9BQS7 1158 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 EDEM3Q9BZQ6 932 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 CEP44Q9C0F1 390 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 CUEDC1Q9NWM3 386 aaPredicted RBP11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 VPS51Q9UID3 782 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 RNF215Q9Y6U7 377 aa11.83□□□□□ -0.52
AMBRA1-207ENST00000529553 M0QYV0 167 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 HGSO14964 777 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 MTSS1O43312 755 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 VPS4BO75351 444 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 ZNF821O75541 412 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 CTSEP14091 401 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 LIFP15018 202 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 RRM1P23921 792 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 LACTB2Q53H82 288 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 C22orf39Q6P5X5 142 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 SETD3Q86TU7 594 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 TICAM1Q8IUC6 712 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 PCDH19Q8TAB3 1148 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 APOBEC4Q8WW27 367 aaKnown RBP11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 PAGE5Q96GU1 130 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 ZNF396Q96N95 335 aaPredicted RBP11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 HAPLN3Q96S86 360 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 EFHD1Q9BUP0 239 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 C1QTNF7Q9BXJ2 289 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 THAP9Q9H5L6 903 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 SIRPGQ9P1W8 387 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 VPS4AQ9UN37 437 aa11.82□□□□□ -0.52
AMBRA1-207ENST00000529553 ICE1Q9Y2F5 2266 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 NYNRINQ9P2P1 1898 aaKnown RBP11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 CXorf51AA0A1B0GTR3 108 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 C16orf96A6NNT2 1141 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 NEMP1O14524 444 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 SNAP91O60641 907 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 KRT38O76015 456 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 RASGRP1O95267 797 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 DDAH2O95865 285 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 CELA2BP08218 269 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 GPD2P43304 727 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 CDK17Q00537 523 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 CENPCQ03188 943 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 SEPT6Q14141 434 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 CRTC2Q53ET0 693 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 CARD16Q5EG05 197 aa11.81□□□□□ -0.52
AMBRA1-207ENST00000529553 CERCAMQ5T4B2 595 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms