RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.52□□□□□ -0.893e-6■□□□□ 9.8
CTNND1-213ENST00000526357 ADAM28Q9UKQ2 775 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 SCAF8Q9UPN6 1271 aaKnown RBP9.52□□□□□ -0.89
CTNND1-213ENST00000526357 EFR3BQ9Y2G0 817 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 PCDHA11Q9Y5I1 949 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 ZNF521Q96K83 1311 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 SLC9A3R1O14745 358 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-213ENST00000526357 AREL1O15033 823 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 ZBTB22O15209 634 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 FGF10O15520 208 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-213ENST00000526357 SLC37A4O43826 429 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 SH3BGRLO75368 114 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 RAPSNQ13702 412 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 RNF148Q8N7C7 305 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 TMEM39BQ9GZU3 492 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 NINJ2Q9NZG7 142 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 STOML2Q9UJZ1 356 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 L1RE1Q9UN81 338 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 GPSM3Q9Y4H4 160 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 PCDHGC5Q9Y5F6 944 aa9.52□□□□□ -0.89
CTNND1-213ENST00000526357 CCNDBP1O95273 360 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 FTH1P02794 183 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PROCP04070 461 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 SNRPB2P08579 225 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 FDPSP14324 419 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 OGNP20774 298 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 AMPD1P23109 780 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 HERVK_113P62684 666 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 NRF1Q16656 503 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 CLIP3Q96DZ5 547 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 POP1Q99575 1024 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 CEP41Q9BYV8 373 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 OGDHLQ9ULD0 1010 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 ZNF780BQ9Y6R6 833 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 ZNF609O15014 1411 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 ZNF432O94892 652 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PIGNO95427 931 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 MNDAP41218 407 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 NDST1P52848 882 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 MRPS22P82650 360 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 TRIM28Q13263 835 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 FAM171A1Q5VUB5 890 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 AFTPHQ6ULP2 937 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 DEFB128Q7Z7B8 93 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 C4orf19Q8IY42 314 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PTCD2Q8WV60 388 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 WBP11Q9Y2W2 641 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 ROBO2Q9HCK4 1378 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 OR10H3O60404 316 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 DHFRP00374 187 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 MAPK8P45983 427 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PDX1P52945 283 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 SNRPD1P62314 119 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 SLC6A3Q01959 620 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 RUNDC3AQ59EK9 446 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 FAAH2Q6GMR7 532 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PEX5LQ8IYB4 626 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 ZSWIM2Q8NEG5 633 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 TRNT1Q96Q11 434 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 ABCC13Q9NSE7 274 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 GGA2Q9UJY4 613 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 WRBO00258 174 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 TPP1O14773 563 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PLIN3O60664 434 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 GATBO75879 557 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PAEPP09466 180 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PKNOX1P55347 436 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 SRSF11Q05519 484 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 FAAP100Q0VG06 881 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 FBXO16Q8IX29 292 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 FBXW8Q8N3Y1 598 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 RFT1Q96AA3 541 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 ITCHQ96J02 903 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 CHCHD6Q9BRQ6 235 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 SLC4A5Q9BY07 1137 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 AGO4Q9HCK5 861 aaKnown RBP9.51□□□□□ -0.89
CTNND1-213ENST00000526357 PSMD13Q9UNM6 376 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 SLC12A4Q9UP95 1085 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 NRKQ7Z2Y5 1582 aa9.51□□□□□ -0.89
CTNND1-213ENST00000526357 C1QTNF3-AMACRE9PGA6 284 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 MDM4O15151 490 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 POMCP01189 267 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 CXCL8P10145 99 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 PDHA2P29803 388 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 IGFALSP35858 605 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 CREMQ03060 361 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 RIPK1Q13546 671 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 RFX4Q33E94 735 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 PIK3R6Q5UE93 754 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 TXNDC11Q6PKC3 985 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 ZNF571Q7Z3V5 609 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-213ENST00000526357 JAZF1Q86VZ6 243 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 SFRP1Q8N474 314 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 CD101Q93033 1021 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 FDXACB1Q9BRP7 624 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-213ENST00000526357 IL22Q9GZX6 179 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 SPAG4Q9NPE6 437 aa9.5□□□□□ -0.89
CTNND1-213ENST00000526357 PXMP2Q9NR77 195 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms