RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CST5P28325 142 aaPredicted RBP4.84□□□□□ -1.63
USP48-211ENST00000526044 ACLYP53396 1101 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 RHDQ02161 417 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 KRT17Q04695 432 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 BMPR2Q13873 1038 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 PLCB4Q15147 1175 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 CNGA2Q16280 664 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 UGCGQ16739 394 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 TMEM119Q4V9L6 283 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 PLAC9Q5JTB6 97 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 ZNF484Q5JVG2 852 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 RGS7BPQ6MZT1 257 aaPredicted RBP4.84□□□□□ -1.63
USP48-211ENST00000526044 CXCL17Q6UXB2 119 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 ANO5Q75V66 913 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 GPT2Q8TD30 523 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 ATP8B4Q8TF62 1192 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 STAMQ92783 540 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 RFKQ969G6 155 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 SYAP1Q96A49 352 aaPredicted RBP4.84□□□□□ -1.63
USP48-211ENST00000526044 PAGE5Q96GU1 130 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 APIPQ96GX9 242 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 ZNF333Q96JL9 665 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 CEP170P1Q96L14 293 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 GLT1D1Q96MS3 346 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 CCDC43Q96MW1 224 aaKnown RBP4.84□□□□□ -1.63
USP48-211ENST00000526044 C16orf70Q9BSU1 422 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 KATNAL1Q9BW62 490 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 GOLPH3LQ9H4A5 285 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 MAGEF1Q9HAY2 307 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 SERHLQ9NQF3 203 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 SACM1LQ9NTJ5 587 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 BLOC1S4Q9NUP1 217 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 DACT1Q9NYF0 836 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 WRAP73Q9P2S5 460 aaPredicted RBP4.84□□□□□ -1.63
USP48-211ENST00000526044 SERTAD3Q9UJW9 196 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 OGDHLQ9ULD0 1010 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 NDRG4Q9ULP0 352 aaKnown RBP4.84□□□□□ -1.63
USP48-211ENST00000526044 SSX2IPQ9Y2D8 614 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 NRCAMQ92823 1304 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 IGSF9BQ9UPX0 1349 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 TMEM150BA6NC51 233 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 HAS3O00219 553 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 DNM1LO00429 736 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 SLC16A3O15427 465 aaKnown RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 URI1O94763 535 aaPredicted RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 NXPH3O95157 252 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 LETM1O95202 739 aaPredicted RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 SMC2O95347 1197 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 MYL1P05976 194 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 PDHA1P08559 390 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 SMIM10L2AP0DMW4 78 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 SMIM10L2BP0DMW5 78 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 CYP11B2P19099 503 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 KLRC1P26715 233 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 TMOD1P28289 359 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 PEX2P28328 305 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 ALDH9A1P49189 494 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 DGKEP52429 567 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 SLC12A3P55017 1021 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 ELLP55199 621 aaPredicted RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 FMO1Q01740 532 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 PRKCEQ02156 737 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 MYO1EQ12965 1108 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 HNRNPA0Q13151 305 aaKnown RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 ITGA7Q13683 1181 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 MYBPC2Q14324 1141 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 ZRSR2Q15696 482 aaKnown RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 CAMK4Q16566 473 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 KLHL40Q2TBA0 621 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 ZNF362Q5T0B9 420 aaPredicted RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 ZNF618Q5T7W0 954 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 RINT1Q6NUQ1 792 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 C1orf186Q6ZWK4 172 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 ADGRG3Q86Y34 549 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 ZNF280BQ86YH2 543 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 U2AF1L4Q8WU68 220 aaKnown RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 MAML1Q92585 1016 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 KAT2BQ92831 832 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 CCDC47Q96A33 483 aaKnown RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 TTC17Q96AE7 1141 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 VOPP1Q96AW1 172 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 NMD3Q96D46 503 aaKnown RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 JPH2Q9BR39 696 aaPredicted RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 SH2D3AQ9BRG2 576 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 SEZ6LQ9BYH1 1024 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 TNMDQ9H2S6 317 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 PPCSQ9HAB8 311 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 SETD4Q9NVD3 440 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 KCND2Q9NZV8 630 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 HDAC6Q9UBN7 1215 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 DKK3Q9UBP4 350 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 MRPS17Q9Y2R5 130 aaKnown RBP4.83□□□□□ -1.64
USP48-211ENST00000526044 ENTPD2Q9Y5L3 495 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 EVPLQ92817 2033 aa4.83□□□□□ -1.64
USP48-211ENST00000526044 MYH11P35749 1972 aa4.82□□□□□ -1.64
USP48-211ENST00000526044 COL1A2P08123 1366 aa4.82□□□□□ -1.64
USP48-211ENST00000526044 FRMPD3Q5JV73 1810 aa4.82□□□□□ -1.64
USP48-211ENST00000526044 C17orf102A2RUQ5 167 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms