RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 CSF2P04141 144 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 CALB1P05937 261 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 TPM2P07951 284 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 RFC1P35251 1148 aaPredicted RBP12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 ACVRL1P37023 503 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 EIF2S3P41091 472 aaKnown RBP12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 RABIFP47224 123 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 AIF1P55008 147 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 YBEYP58557 167 aaPredicted RBP12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 CLEC16AQ2KHT3 1053 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 C15orf59Q2T9L4 293 aaPredicted RBP12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 FAM72AQ5TYM5 149 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 CDCP2Q5VXM1 449 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 FAM72DQ6L9T8 149 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 WDR59Q6PJI9 974 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 KYAT3Q6YP21 454 aaKnown RBP12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 FAM72BQ86X60 149 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 DRC7Q8IY82 874 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 C3orf20Q8ND61 904 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 OR2AP1Q8NGE2 309 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 GRIN3AQ8TCU5 1115 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 GPT2Q8TD30 523 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 HCAR2Q8TDS4 363 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 KLK6Q92876 244 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 ARHGEF26Q96DR7 871 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 ERGIC2Q96RQ1 377 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 DUSP23Q9BVJ7 150 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 OSBPL1AQ9BXW6 950 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 FAM207AQ9NSI2 230 aaPredicted RBP12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 UCKL1Q9NWZ5 548 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 ADAM22Q9P0K1 906 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 CLCA2Q9UQC9 943 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 FCF1Q9Y324 198 aaKnown RBP12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 WDFY3Q8IZQ1 3526 aa12.86□□□□□ -0.35
TOP1MT-217ENST00000523417 POM121BA6NF01 834 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 TPP1O14773 563 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 MT-CO3P00414 261 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 NME1P15531 152 aaKnown RBP12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 NSFP46459 744 aaKnown RBP12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 KLK7P49862 253 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 DUSP3P51452 185 aaPredicted RBP12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 DNA2P51530 1060 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 CLDN2P57739 230 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 PFN3P60673 137 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 SNRPD1P62314 119 aaKnown RBP12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 SGCGQ13326 291 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 FZD2Q14332 565 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 POLD3Q15054 466 aaPredicted RBP12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 HS1BP3Q53T59 392 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 PARS2Q7L3T8 475 aaKnown RBP12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 SLFN11Q7Z7L1 901 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 DENND6BQ8NEG7 585 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 SNIP1Q8TAD8 396 aaKnown RBP12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 FAM172AQ8WUF8 416 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 CENPTQ96BT3 561 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 TBC1D31Q96DN5 1066 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 TBATAQ96M53 351 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 C11orf70Q9BRQ4 267 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 MAGEB5Q9BZ81 275 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 CPEB1Q9BZB8 566 aaKnown RBP12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 NOL6Q9H6R4 1146 aaKnown RBP12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 NLRC4Q9NPP4 1024 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 DKK3Q9UBP4 350 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 ASXL3Q9C0F0 2248 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 ITPR1Q14643 2758 aa12.85□□□□□ -0.35
TOP1MT-217ENST00000523417 DOCK4Q8N1I0 1966 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 LY6G6EA0A0G2JKS1 128 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 IGLON5A6NGN9 336 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 FPGTO14772 594 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 RAD51BO15315 384 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 OPA1O60313 960 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 RAMP2O60895 175 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 SDC3O75056 442 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 ALPPL2P10696 532 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 GPD1P21695 349 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 HTR7P34969 479 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 SUOXP51687 545 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 ZNF143P52747 638 aaPredicted RBP12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 PPP1R15BQ5SWA1 713 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 RWDD4Q6NW29 188 aaKnown RBP12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 MON1BQ7L1V2 547 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 UMODL1-AS1Q8N2C9 162 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 CCDC185Q8N715 623 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 RTL3Q8N8U3 475 aaKnown RBP12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 FGF11Q92914 225 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 GRAMD1AQ96CP6 724 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 VCPIP1Q96JH7 1222 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 CALN1Q9BXU9 219 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 TTYH3Q9C0H2 523 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 FZD3Q9NPG1 666 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 NCKIPSDQ9NZQ3 722 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 DNAI1Q9UI46 699 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 SALL4Q9UJQ4 1053 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 ACTL7AQ9Y615 435 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 U3KQA8 63 aa12.84□□□□□ -0.35
TOP1MT-217ENST00000523417 LGALS16A8MUM7 142 aa12.83□□□□□ -0.36
TOP1MT-217ENST00000523417 K7ESM1 405 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms