RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 KIAA1614Q5VZ46 1190 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 FAM171BQ6P995 826 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 CRELD2Q6UXH1 353 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-211ENST00000522802 TMEM86AQ8N2M4 240 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 NSUN7Q8NE18 718 aaKnown RBP6.66□□□□□ -1.34
VPS13B-211ENST00000522802 ENGASEQ8NFI3 743 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 SCFD1Q8WVM8 642 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 KBTBD7Q8WVZ9 684 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 CPA5Q8WXQ8 436 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 OTUB2Q96DC9 234 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 PCED1BQ96HM7 432 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 HIC2Q96JB3 615 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 CNDP2Q96KP4 475 aaKnown RBP6.66□□□□□ -1.34
VPS13B-211ENST00000522802 PLIN2Q99541 437 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 SLC38A3Q99624 504 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 SYT15Q9BQS2 421 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 REEP2Q9BRK0 252 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 TIPINQ9BVW5 301 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 BBS2Q9BXC9 721 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 ASB7Q9H672 318 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 ITM2CQ9NQX7 267 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 CATSPERZQ9NTU4 200 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 ASH2LQ9UBL3 628 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 IL17BQ9UHF5 180 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 CBLCQ9ULV8 474 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 SH3BP1Q9Y3L3 701 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 NME7Q9Y5B8 376 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 PCDHB6Q9Y5E3 794 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 PCDHB1Q9Y5F3 818 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 SNX9Q9Y5X1 595 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 PTPRJQ12913 1337 aa6.66□□□□□ -1.34
VPS13B-211ENST00000522802 SPENQ96T58 3664 aaKnown RBP6.66□□□□□ -1.34
VPS13B-211ENST00000522802 COL27A1Q8IZC6 1860 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-211ENST00000522802 NYNRINQ9P2P1 1898 aaKnown RBP6.66□□□□□ -1.34
VPS13B-211ENST00000522802 AHCTF1Q8WYP5 2266 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 A0A1B0GTQ1 180 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 CCDC66A2RUB6 948 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 PAPSS1O43252 624 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-211ENST00000522802 AMY2AP04746 511 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 AMY2BP19961 511 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 PRKCHP24723 683 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ANXA13P27216 316 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 PCSK1P29120 753 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ACSL1P33121 698 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 IGFALSP35858 605 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 PNPLA4P41247 253 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 PGFP49763 221 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 TFAMQ00059 246 aaKnown RBP6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ST3GAL1Q11201 340 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 NFATC3Q12968 1075 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ORC2Q13416 577 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-211ENST00000522802 STARD3Q14849 445 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ZRSR1Q15695 479 aaKnown RBP6.65□□□□□ -1.34
VPS13B-211ENST00000522802 MDH1BQ5I0G3 518 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ADALQ6DHV7 355 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 VSTM1Q6UX27 236 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 KDM7AQ6ZMT4 941 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 C4orf50Q6ZRC1 276 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 TPGS1Q6ZTW0 290 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 TMPRSS6Q8IU80 811 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 TRIM48Q8IWZ4 208 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 DCBLD1Q8N8Z6 715 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ZNF248Q8NDW4 579 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 GTF3C6Q969F1 213 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 BIRC7Q96CA5 298 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 FIZ1Q96SL8 496 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ORAI3Q9BRQ5 295 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ZNF518BQ9C0D4 1074 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 ANKMY1Q9P2S6 941 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 MAGEC2Q9UBF1 373 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-211ENST00000522802 MYOTQ9UBF9 498 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 SIX4Q9UIU6 781 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 AGAP1Q9UPQ3 857 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 PLAAQ9Y263 795 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 COQ6Q9Y2Z9 468 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 PCDHB4Q9Y5E5 795 aa6.65□□□□□ -1.34
VPS13B-211ENST00000522802 TNPO3Q9Y5L0 923 aaKnown RBP6.65□□□□□ -1.34
VPS13B-211ENST00000522802 CLDN5O00501 218 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 LAD1O00515 517 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 LDOC1O95751 146 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-211ENST00000522802 TSPAN15O95858 294 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 CISD3P0C7P0 127 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 PPP3CCP48454 512 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 GYS2P54840 703 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 UCNP55089 124 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 ENPP2Q13822 863 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 TRIM29Q14134 588 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 GPR19Q15760 415 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 ME3Q16798 604 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 GEN1Q17RS7 908 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 BROXQ5VW32 411 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 KRT79Q5XKE5 535 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 ZCCHC8Q6NZY4 707 aaKnown RBP6.64□□□□□ -1.35
VPS13B-211ENST00000522802 ATG14Q6ZNE5 492 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 ARHGAP36Q6ZRI8 547 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 OVCH1Q7RTY7 1134 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 EID2Q8N6I1 236 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 LRRC52Q8N7C0 313 aa6.64□□□□□ -1.35
VPS13B-211ENST00000522802 SYT2Q8N9I0 419 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-211ENST00000522802 SNRNP27Q8WVK2 155 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms