RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 KIAA1522Q9P206 1035 aaPredicted RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 TMCO1Q9UM00 188 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 KCPQ6ZWJ8 1503 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 PSMD12O00232 456 aaPredicted RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 CLDN11O75508 207 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 PDE9AO76083 593 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 C22orf31O95567 290 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 CTSEP14091 401 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 DGKAP23743 735 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 PSMB4P28070 264 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 SSTR1P30872 391 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 PTDSS1P48651 473 aaKnown RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 DMPKQ09013 629 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 COL9A3Q14050 684 aaPredicted RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 TRIP4Q15650 581 aaPredicted RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 TRAPPC5Q8IUR0 188 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 C1orf127Q8N9H9 656 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 ST13P5Q8NFI4 369 aaPredicted RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 GRIN3AQ8TCU5 1115 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 ZNF75CPQ92670 426 aaPredicted RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 OTULINQ96BN8 352 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 REPS1Q96D71 796 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 BTN2A3PQ96KV6 586 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 GMLQ99445 158 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 NTPCRQ9BSD7 190 aaKnown RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 AKAP7Q9P0M2 348 aaPredicted RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 CHD2O14647 1828 aaKnown RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 STAU1O95793 577 aaKnown RBP16.36■□□□□ 0.21
USP42-207ENST00000521713 NR6A1Q15406 480 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 PPP4R4Q6NUP7 873 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 DBF4BQ8NFT6 615 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 TMEM237Q96Q45 408 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 SEMA3CQ99985 751 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 GINS4Q9BRT9 223 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 KLHL3Q9UH77 587 aa16.36■□□□□ 0.21
USP42-207ENST00000521713 KPNA5O15131 536 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 NDUFS2O75306 463 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 USP12O75317 370 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 MMP8P22894 467 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 NDUFA5Q16718 116 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 KIAA1324Q6UXG2 1013 aaKnown RBP16.35■□□□□ 0.21
USP42-207ENST00000521713 C7orf61Q8IZ16 206 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 ATAD1Q8NBU5 361 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 DIS3LQ8TF46 1054 aaKnown RBP16.35■□□□□ 0.21
USP42-207ENST00000521713 LENG1Q96BZ8 264 aaPredicted RBP16.35■□□□□ 0.21
USP42-207ENST00000521713 ASB2Q96Q27 587 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 ACOX2Q99424 681 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 NINJ2Q9NZG7 142 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 PNMA8BQ9ULN7 279 aaPredicted RBP16.35■□□□□ 0.21
USP42-207ENST00000521713 LRRC37A3O60309 1634 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 FAM208AQ9UK61 1670 aaKnown RBP16.35■□□□□ 0.21
USP42-207ENST00000521713 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 KATNA1O75449 491 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 TYMPP19971 482 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 TRIM25Q14258 630 aaKnown RBP16.35■□□□□ 0.21
USP42-207ENST00000521713 GPR158Q5T848 1215 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 N4BP2L1Q5TBK1 243 aaPredicted RBP16.35■□□□□ 0.21
USP42-207ENST00000521713 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.35■□□□□ 0.21
USP42-207ENST00000521713 C19orf18Q8NEA5 215 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 OR56A4Q8NGH8 313 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 HDAC7Q8WUI4 952 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 SEMA4DQ92854 862 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 SNX27Q96L92 541 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 TM6SF2Q9BZW4 377 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 LIASO43766 372 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 NBNO60934 754 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 BMP10O95393 424 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
USP42-207ENST00000521713 RPL7AP62424 266 aaKnown RBP16.35■□□□□ 0.21
USP42-207ENST00000521713 CYLDQ9NQC7 956 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 GOT1P17174 413 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 IL2P60568 153 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 NCF4Q15080 339 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 ABHD8Q96I13 439 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 FZD8Q9H461 694 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 ZNF112Q9UJU3 913 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 TPRKBQ9Y3C4 175 aa16.35■□□□□ 0.21
USP42-207ENST00000521713 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 NFKB1P19838 968 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 DOK6Q6PKX4 331 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 KREMEN1Q96MU8 473 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 ASB8Q9H765 288 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 MIEF1Q9NQG6 463 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 PIH1D1Q9NWS0 290 aaKnown RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 GUCA1CO95843 209 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 ITGAVP06756 1048 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 IFI35P80217 286 aaPredicted RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 NFYCQ13952 458 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 ARMC3Q5W041 872 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 HEATR4Q86WZ0 1026 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 CENPLQ8N0S6 344 aaPredicted RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 OR8H2Q8N162 312 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 MED8Q96G25 268 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 CDHR5Q9HBB8 845 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 XPNPEP1Q9NQW7 623 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 MAN1C1Q9NR34 630 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 RCOR3Q9P2K3 495 aaPredicted RBP16.34■□□□□ 0.21
USP42-207ENST00000521713 GRM3Q14832 879 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 CYP2A13Q16696 494 aa16.34■□□□□ 0.21
USP42-207ENST00000521713 MPPE1Q53F39 396 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms