RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 HOXA13P31271 388 aaPredicted RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 SLC6A4P31645 630 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 ATICP31939 592 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 GTF2H1P32780 548 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 MDH1P40925 334 aaKnown RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 CCT5P48643 541 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 CARSP49589 748 aaKnown RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 CYP2J2P51589 502 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 VAMP7P51809 220 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 ZNF131P52739 623 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 GALCP54803 685 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 DRG2P55039 364 aaKnown RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 ZNF280AP59817 542 aaPredicted RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 PSMC1P62191 440 aaKnown RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 DR1Q01658 176 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 CAV1Q03135 178 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 CALCOCO2Q13137 446 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 MPP3Q13368 585 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 PRPF4BQ13523 1007 aaKnown RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 TNFAIP1Q13829 316 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 DRAP1Q14919 205 aaPredicted RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 DENND2CQ68D51 928 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 C11orf63Q6NUN7 778 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 ZNF365Q70YC5 407 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 YTHDF3Q7Z739 585 aaKnown RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 ANKRD23Q86SG2 305 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 TADA2BQ86TJ2 420 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 RPAINQ86UA6 219 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 NT5DC3Q86UY8 548 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 CCDC50Q8IVM0 306 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 IQCKQ8N0W5 287 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 CPXCR1Q8N123 301 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 MYO1HQ8N1T3 1032 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 XXYLT1Q8NBI6 393 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 BBOF1Q8ND07 529 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 RDM1Q8NG50 284 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 SLC35G2Q8TBE7 412 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 GRK7Q8WTQ7 553 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 LPAR1Q92633 364 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 KAT5Q92993 513 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 NACC2Q96BF6 587 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 ERP27Q96DN0 273 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 HES6Q96HZ4 224 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 INPP4AQ96PE3 977 aaPredicted RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 DMRTA2Q96SC8 542 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 MYCBPQ99417 103 aaPredicted RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 FMO2Q99518 471 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 AGPAT1Q99943 283 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 MXRA8Q9BRK3 442 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 LXNQ9BS40 222 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 INTS2Q9H0H0 1204 aaKnown RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 TDRD3Q9H7E2 651 aaKnown RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 VCPKMTQ9H867 229 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 ACTR5Q9H9F9 607 aaPredicted RBP5.4□□□□□ -1.54
HDAC2-204ENST00000518756 TMBIM4Q9HC24 238 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 KIAA1586Q9HCI6 787 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 AGPAT3Q9NRZ7 376 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 CTTNBP2NLQ9P2B4 639 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 INSL6Q9Y581 213 aa5.4□□□□□ -1.54
HDAC2-204ENST00000518756 ASTN1O14525 1302 aa5.4□□□□□ -1.55
HDAC2-204ENST00000518756 SLX4Q8IY92 1834 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 IGLV3-22A0A075B6J6 115 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 GMNCA6NCL1 334 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 PRRT4C9JH25 899 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 E7EVH7 732 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 WDR46O15213 610 aaKnown RBP5.39□□□□□ -1.55
HDAC2-204ENST00000518756 EDIL3O43854 480 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 ZC3H11AO75152 810 aaKnown RBP eCLIP5.39□□□□□ -1.55
HDAC2-204ENST00000518756 AGFG2O95081 481 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 LYPLA2O95372 231 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 FAM107AO95990 144 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 FGGP02679 453 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 TFRCP02786 760 aaKnown RBP5.39□□□□□ -1.55
HDAC2-204ENST00000518756 ICAM1P05362 532 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 SBK3P0C264 359 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 MYBL1P10243 752 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 ACTN1P12814 892 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 TYRP1P17643 537 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 NMT1P30419 496 aaKnown RBP5.39□□□□□ -1.55
HDAC2-204ENST00000518756 SLC1A1P43005 524 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 QARSP47897 775 aaKnown RBP5.39□□□□□ -1.55
HDAC2-204ENST00000518756 PPM1FP49593 454 aaPredicted RBP5.39□□□□□ -1.55
HDAC2-204ENST00000518756 PDE6CP51160 858 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 CASP5P51878 434 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 PTENP60484 403 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 PSMC6P62333 389 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 FOXI1Q12951 378 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 DMP1Q13316 513 aaPredicted RBP5.39□□□□□ -1.55
HDAC2-204ENST00000518756 KIF22Q14807 665 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 PLCB4Q15147 1175 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 TMEM240Q5SV17 173 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 KRT39Q6A163 491 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 FBXO42Q6P3S6 717 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 CCDC121Q6ZUS5 278 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 CPLX4Q7Z7G2 160 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 ZNF677Q86XU0 584 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 METTL13Q8N6R0 699 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 LRRC57Q8N9N7 239 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 VPS37AQ8NEZ2 397 aa5.39□□□□□ -1.55
HDAC2-204ENST00000518756 PIGOQ8TEQ8 1089 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms