RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SLC18A2Q05940 514 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 PTP4A2Q12974 167 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 PRTGQ2VWP7 1150 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 EPHA10Q5JZY3 1008 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 WASHC2DQ5SRD0 308 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 LRCH2Q5VUJ6 765 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 ATG9BQ674R7 924 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 NUGGCQ68CJ6 796 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 ACAD10Q6JQN1 1059 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 TMEM71Q6P5X7 295 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 SLC22A25Q6T423 547 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 HEATR4Q86WZ0 1026 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 RBFAQ8N0V3 343 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 TCP11L2Q8N4U5 519 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 HORMAD2Q8N7B1 307 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 TEX45Q8NA69 505 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 SCARB1Q8WTV0 552 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 TBC1D22AQ8WUA7 517 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 EVI5LQ96CN4 794 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 WDR6Q9NNW5 1121 aaKnown RBP3.91□□□□□ -1.78
VPS13B-207ENST00000518569 SIRT3Q9NTG7 399 aaPredicted RBP3.91□□□□□ -1.78
VPS13B-207ENST00000518569 PLEKHB1Q9UF11 243 aaPredicted RBP3.91□□□□□ -1.78
VPS13B-207ENST00000518569 ARHGAP26Q9UNA1 814 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.91□□□□□ -1.78
VPS13B-207ENST00000518569 PCDHGB5Q9Y5G0 923 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 CBY3A6NI87 242 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 B4DGG1 531 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 J3KRW8 73 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 TOMM40O96008 361 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 ARSBP15848 533 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 ZNF8P17098 575 aaPredicted RBP3.9□□□□□ -1.79
VPS13B-207ENST00000518569 CTPS1P17812 591 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 ABCD3P28288 659 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 ELF1P32519 619 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 TTKP33981 857 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 PAFAH1B1P43034 410 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 CDH12P55289 794 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 SELENOVP59797 346 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 ZP1P60852 638 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 UFM1P61960 85 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 UBAP2Q5T6F2 1119 aaKnown RBP3.9□□□□□ -1.79
VPS13B-207ENST00000518569 TMEM81Q6P7N7 255 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 RRM2BQ7LG56 351 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 TADA2BQ86TJ2 420 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 FAM160B2Q86V87 743 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 CHD1LQ86WJ1 897 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 ARMC8Q8IUR7 673 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 TMEM199Q8N511 208 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 PLD5Q8N7P1 536 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 PCYOX1LQ8NBM8 494 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 NFKBIDQ8NI38 313 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 CEP76Q8TAP6 659 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 SLC35F5Q8WV83 523 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 RFFLQ8WZ73 363 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 ATOH1Q92858 354 aaPredicted RBP3.9□□□□□ -1.79
VPS13B-207ENST00000518569 RNF183Q96D59 192 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 RRP36Q96EU6 259 aaKnown RBP3.9□□□□□ -1.79
VPS13B-207ENST00000518569 FAM234AQ9H0X4 552 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 SLC32A1Q9H598 525 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 VEZTQ9HBM0 779 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 SPATS2LQ9NUQ6 558 aaKnown RBP3.9□□□□□ -1.79
VPS13B-207ENST00000518569 KCND2Q9NZV8 630 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 MPP6Q9NZW5 540 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 KIAA1456Q9P272 454 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 PEMTQ9UBM1 199 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 RAI2Q9Y5P3 530 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 ADGRF5Q8IZF2 1346 aa3.9□□□□□ -1.79
VPS13B-207ENST00000518569 H3BNX3 289 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 TAF4O00268 1085 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 OAZ2O95190 189 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 GNLYP22749 145 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 FMO4P31512 558 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 RYKP34925 604 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 KRT9P35527 623 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 PPP3CCP48454 512 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 CCT4P50991 539 aaKnown RBP3.89□□□□□ -1.79
VPS13B-207ENST00000518569 G3BP1Q13283 466 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS13B-207ENST00000518569 TDGQ13569 410 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 PLEKHO1Q53GL0 409 aaPredicted RBP3.89□□□□□ -1.79
VPS13B-207ENST00000518569 DCAF6Q58WW2 860 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 ZNF667Q5HYK9 610 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 DCAF12L2Q5VW00 463 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 TECPR1Q7Z6L1 1165 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 PATL1Q86TB9 770 aaKnown RBP3.89□□□□□ -1.79
VPS13B-207ENST00000518569 GLCCI1Q86VQ1 547 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 TEX19Q8NA77 164 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 C7orf57Q8NEG2 295 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 GDPD5Q8WTR4 605 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 URB1-AS1Q96HZ7 61 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 SLC26A6Q9BXS9 759 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 MVB12BQ9H7P6 319 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 CATSPERBQ9H7T0 1116 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 PLAC1Q9HBJ0 212 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 KRCC1Q9NPI7 259 aaPredicted RBP3.89□□□□□ -1.79
VPS13B-207ENST00000518569 BABAM1Q9NWV8 329 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 SQORQ9Y6N5 450 aa3.89□□□□□ -1.79
VPS13B-207ENST00000518569 A0A1W2PQM1 296 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 RPS10-NUDT3A0A1W2PQS6 291 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 FAM90A10PA6NDY2 464 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 MYMKA6NI61 221 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms