RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 MAK16Q9BXY0 300 aaKnown RBP22.32■■□□□ 1.16
VEGFA-217ENST00000518538 KDM4CQ9H3R0 1056 aa22.32■■□□□ 1.16
VEGFA-217ENST00000518538 MACROD2A1Z1Q3 448 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 GRID2IPA4D2P6 1211 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 PLRG1O43660 514 aaKnown RBP22.31■■□□□ 1.16
VEGFA-217ENST00000518538 NRDCO43847 1150 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 PEX11BO96011 259 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 ITGB7P26010 798 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 GKP32189 559 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 GARSP41250 739 aaKnown RBP22.31■■□□□ 1.16
VEGFA-217ENST00000518538 CCZ1BP86790 482 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 CCZ1P86791 482 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-217ENST00000518538 LBRQ14739 615 aaKnown RBP22.31■■□□□ 1.16
VEGFA-217ENST00000518538 PIP5KL1Q5T9C9 394 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 KIAA0895LQ68EN5 471 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 SLC9A4Q6AI14 798 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 NCEH1Q6PIU2 408 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 MFSD7Q6UXD7 560 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 ERN2Q76MJ5 926 aaKnown RBP22.31■■□□□ 1.16
VEGFA-217ENST00000518538 PLD5Q8N7P1 536 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 DNASE2BQ8WZ79 361 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 VOPP1Q96AW1 172 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 EXOC2Q96KP1 924 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 HDAC8Q9BY41 377 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 TSGA10Q9BZW7 698 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 TMEM74BQ9NUR3 256 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 SEPT3Q9UH03 358 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 EVLQ9UI08 416 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-217ENST00000518538 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-217ENST00000518538 CEP192Q8TEP8 1941 aa22.31■■□□□ 1.16
VEGFA-217ENST00000518538 ATXN2Q99700 1313 aaKnown RBP22.31■■□□□ 1.16
VEGFA-217ENST00000518538 FAM47DPA6NHR8 397 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 APOL1O14791 398 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 FOXD2O60548 495 aaPredicted RBP22.3■■□□□ 1.16
VEGFA-217ENST00000518538 ZFXP17010 805 aaPredicted RBP22.3■■□□□ 1.16
VEGFA-217ENST00000518538 CTNNA1P35221 906 aaKnown RBP22.3■■□□□ 1.16
VEGFA-217ENST00000518538 CDKN2BP42772 138 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 CSNK1DP48730 415 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 MARCKSL1P49006 195 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 GBE1Q04446 702 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 SLC10A7Q0GE19 358 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 TAZQ16635 292 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 ZNF805Q5CZA5 627 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 RFX6Q8HWS3 928 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 RCOR2Q8IZ40 523 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 RGL4Q8IZJ4 473 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 TSEN2Q8NCE0 465 aaKnown RBP22.3■■□□□ 1.16
VEGFA-217ENST00000518538 NSMCE1Q8WV22 266 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 KRT35Q92764 455 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 PSKH2Q96QS6 385 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 CPEB1Q9BZB8 566 aaKnown RBP22.3■■□□□ 1.16
VEGFA-217ENST00000518538 DTLQ9NZJ0 730 aa22.3■■□□□ 1.16
VEGFA-217ENST00000518538 C10orf142B7Z368 130 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 ZRANB2O95218 330 aaKnown RBP eCLIP22.29■■□□□ 1.164e-17■■□□□ 11.4
VEGFA-217ENST00000518538 MAP3K6O95382 1288 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 MX2P20592 715 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 RENBPP51606 427 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 NEK3P51956 506 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 NSUN2Q08J23 767 aaKnown RBP eCLIP22.29■■□□□ 1.16
VEGFA-217ENST00000518538 SLC10A2Q12908 348 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-217ENST00000518538 GRM3Q14832 879 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 TIGD7Q6NT04 549 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-217ENST00000518538 SPOCD1Q6ZMY3 1216 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 PRR23CQ6ZRP0 262 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 RABEPKQ7Z6M1 372 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 KIAA2013Q8IYS2 634 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 SYCE1Q8N0S2 351 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 EXD1Q8NHP7 514 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 BIRC7Q96CA5 298 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 RBM41Q96IZ5 413 aaKnown RBP22.29■■□□□ 1.16
VEGFA-217ENST00000518538 ZNF830Q96NB3 372 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-217ENST00000518538 TSGA13Q96PP4 275 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 SMOC1Q9H4F8 434 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 SUSD2Q9UGT4 822 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 TPX2Q9ULW0 747 aaKnown RBP22.29■■□□□ 1.16
VEGFA-217ENST00000518538 PCDHA3Q9Y5H8 950 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 PIEZO1Q92508 2521 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 SDK1Q7Z5N4 2213 aa22.29■■□□□ 1.16
VEGFA-217ENST00000518538 CCDC66A2RUB6 948 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 FSBPO95073 299 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 UGT2B4P06133 528 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 IGHV4-34P06331 123 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 CTNNA2P26232 953 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 MAOBP27338 520 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 HSPA9P38646 679 aaKnown RBP22.28■■□□□ 1.16
VEGFA-217ENST00000518538 RGRP47804 291 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 TAS2R38P59533 333 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 ZNF235Q14590 738 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 DUOXA1Q1HG43 343 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 TFDP3Q5H9I0 405 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 GDPD4Q6W3E5 623 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 NT5DC3Q86UY8 548 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 BBS5Q8N3I7 341 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 RNF10Q8N5U6 811 aaKnown RBP22.28■■□□□ 1.16
VEGFA-217ENST00000518538 CEP76Q8TAP6 659 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 SNX19Q92543 992 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 ANP32BQ92688 251 aaKnown RBP22.28■■□□□ 1.16
VEGFA-217ENST00000518538 FATE1Q969F0 183 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 HDAC11Q96DB2 347 aa22.28■■□□□ 1.16
VEGFA-217ENST00000518538 KLHL32Q96NJ5 620 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms