RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ACCSLQ4AC99 568 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 SLC45A4Q5BKX6 768 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 MARC1Q5VT66 337 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 HEATR6Q6AI08 1181 aaKnown RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 LEKR1Q6ZMV7 388 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 Q6ZVU0 165 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 CDKL3Q8IVW4 592 aaPredicted RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 CCDC33Q8N5R6 958 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF366Q8N895 744 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 OR2AP1Q8NGE2 309 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 COG1Q8WTW3 980 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 FRS2Q8WU20 508 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 MAML1Q92585 1016 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 PTPRN2Q92932 1015 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 GDAP1L1Q96MZ0 367 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 QKIQ96PU8 341 aaKnown RBP eCLIP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 PSKH2Q96QS6 385 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 VAT1Q99536 393 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 LGMNQ99538 433 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 FERMT1Q9BQL6 677 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 C1QTNF1Q9BXJ1 281 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 POLMQ9NP87 494 aaPredicted RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 C11orf16Q9NQ32 467 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 HOMER3Q9NSC5 361 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 RNF14Q9UBS8 474 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 SEPT3Q9UH03 358 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 AMACRQ9UHK6 382 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 FCF1Q9Y324 198 aaKnown RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 ACTL7AQ9Y615 435 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 ZFC3H1O60293 1989 aaKnown RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 GON4LQ3T8J9 2241 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 GOLGA6L10A0A0M3HER8 536 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 BCLAF3A2AJT9 711 aaKnown RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 FAM86C2PA6NEL3 165 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 K7ERQ8 282 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 KCNK1O00180 336 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF185O15231 689 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 SMAD6O43541 496 aaKnown RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 PI15O43692 258 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 GPR37L1O60883 481 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 SIN3BO75182 1162 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF821O75541 412 aaPredicted RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 PAPSS2O95340 614 aaPredicted RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 VAV1P15498 845 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 WASP42768 502 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 PAFAH1B1P43034 410 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 SNRPD1P62314 119 aaKnown RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 IFI35P80217 286 aaPredicted RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 ZBTB17Q13105 803 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 MTAPQ13126 283 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 GRM3Q14832 879 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 SIX1Q15475 284 aaPredicted RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 CCNG2Q16589 344 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 CARD16Q5EG05 197 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 RALGPS1Q5JS13 557 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 PLA2G2CQ5R387 149 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 ALG1LQ6GMV1 187 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 DESI1Q6ICB0 168 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 DRICH1Q6PGQ1 229 aaPredicted RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 ADAT2Q7Z6V5 191 aaKnown RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 DSG4Q86SJ6 1040 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 TEX26Q8N6G2 289 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 TMEM105Q8N8V8 129 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 C12orf50Q8NA57 414 aaPredicted RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 TSEN2Q8NCE0 465 aaKnown RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 TSTD1Q8NFU3 115 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 OR2T3Q8NH03 318 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 SLC35B2Q8TB61 432 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 HTR3CQ8WXA8 447 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 OR8D1Q8WZ84 308 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 NKD2Q969F2 451 aaPredicted RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 MS4A14Q96JA4 679 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 IL12RB2Q99665 862 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 FAM118BQ9BPY3 351 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 MGME1Q9BQP7 344 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 TM6SF2Q9BZW4 377 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 POLR1EQ9GZS1 481 aaKnown RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 TNKS2Q9H2K2 1166 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 CD248Q9HCU0 757 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 PRSS16Q9NQE7 514 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 LHX3Q9UBR4 397 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 DNPEPQ9ULA0 475 aa7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 R3HDM2Q9Y2K5 976 aaKnown RBP7.7□□□□□ -1.18
HMGXB3-204ENST00000513318 PIKFYVEQ9Y2I7 2098 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 A0A1W2PQF6 199 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 TCRBV21S2A2A0A5A6 115 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 C1QTNF3-AMACRE9PGA6 284 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 RNF103O00237 685 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 KCNN4O15554 427 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 ZBTB24O43167 697 aaPredicted RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 LAMTOR5O43504 91 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 LIASO43766 372 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 BNIP3LO60238 219 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF500O60304 480 aaPredicted RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 RNASEH1O60930 286 aaKnown RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 PHF2O75151 1096 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 ALDH1A2O94788 518 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 STK10O94804 968 aaKnown RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 PRNPP04156 253 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 HLA-DQB2P05538 268 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms