RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 LCA5LO95447 670 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 POP4O95707 220 aaKnown RBP14.19□□□□□ -0.14
DDX41-212ENST00000511040 IGSF6O95976 241 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 UGT2B4P06133 528 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 KRT7P08729 469 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 CD27P26842 260 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 ARHGAP25P42331 645 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 CSNK1EP49674 416 aaKnown RBP14.19□□□□□ -0.14
DDX41-212ENST00000511040 INO80DQ53TQ3 878 aaPredicted RBP14.19□□□□□ -0.14
DDX41-212ENST00000511040 RAD9BQ6WBX8 426 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 ERN2Q76MJ5 926 aaKnown RBP14.19□□□□□ -0.14
DDX41-212ENST00000511040 RABEPKQ7Z6M1 372 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 TMTC1Q8IUR5 882 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 PLPP6Q8IY26 295 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 C1orf216Q8TAB5 229 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 CASKIN2Q8WXE0 1202 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 RAPGEF5Q92565 580 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 KLK6Q92876 244 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 FAM131CQ96AQ9 280 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 SLC6A18Q96N87 628 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 ORAI3Q9BRQ5 295 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 GOLPH3Q9H4A6 298 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 TM9SF3Q9HD45 589 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 TMEM9BQ9NQ34 198 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 DLL3Q9NYJ7 618 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 IPO11Q9UI26 975 aaKnown RBP14.19□□□□□ -0.14
DDX41-212ENST00000511040 LCMT1Q9UIC8 334 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 EPN1Q9Y6I3 576 aaPredicted RBP14.19□□□□□ -0.14
DDX41-212ENST00000511040 LAMA1P25391 3075 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 CEP250Q9BV73 2442 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 A0A1B0GVT2 93 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 WNT9AO14904 365 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 MFSD11O43934 449 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 RNGTTO60942 597 aaKnown RBP14.18□□□□□ -0.14
DDX41-212ENST00000511040 PALMO75781 387 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 NDUFA10O95299 355 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 MAP3K6O95382 1288 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 COMTP21964 271 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 KCNA4P22459 653 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 FECHP22830 423 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 ITGB7P26010 798 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 CDC25BP30305 580 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 RGRP47804 291 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 CCR5P51681 352 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 ATXN3P54252 364 aaPredicted RBP14.18□□□□□ -0.14
DDX41-212ENST00000511040 GRIK2Q13002 908 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 PUM1Q14671 1186 aaKnown RBP eCLIP14.18□□□□□ -0.141e-6■□□□□ 10.3
DDX41-212ENST00000511040 ANKRD20A8PQ5CZ79 823 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 LRRC73Q5JTD7 316 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 PARS2Q7L3T8 475 aaKnown RBP14.18□□□□□ -0.14
DDX41-212ENST00000511040 LZTR1Q8N653 840 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 ACRBPQ8NEB7 543 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 PCDH19Q8TAB3 1148 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 FAM71BQ8TC56 605 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 VOPP1Q96AW1 172 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 PPP1R16AQ96I34 528 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 KLHL32Q96NJ5 620 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 HDAC8Q9BY41 377 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 RCOR3Q9P2K3 495 aaPredicted RBP14.18□□□□□ -0.14
DDX41-212ENST00000511040 REXO2Q9Y3B8 237 aaKnown RBP14.18□□□□□ -0.14
DDX41-212ENST00000511040 PCDH15Q96QU1 1955 aa14.18□□□□□ -0.14
DDX41-212ENST00000511040 PLXNA2O75051 1894 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 A0A1W2PPC4 97 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 A0A1W2PQU0 124 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 LRRD1A4D1F6 860 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 RCCD1A6NED2 376 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 C10orf142B7Z368 130 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 ARHGAP33O14559 1287 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 BUB1BO60566 1050 aaPredicted RBP14.17□□□□□ -0.14
DDX41-212ENST00000511040 GJB3O75712 270 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 PCDH8O95206 1070 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 PIGNO95427 931 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 KRT1P04264 644 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 ADRB3P13945 408 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 PRLRP16471 622 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 SDHBP21912 280 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 NEK3P51956 506 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 LIMK1P53667 647 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 BNC1Q01954 994 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 IL10RBQ08334 325 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 PDK2Q15119 407 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 TCEAL1Q15170 157 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 ZNF805Q5CZA5 627 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 NCBP2-AS2Q69YL0 99 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 FBXL19Q6PCT2 694 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 GDPD4Q6W3E5 623 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 MINDY1Q8N5J2 469 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 ATPAF2Q8N5M1 289 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 TSEN2Q8NCE0 465 aaKnown RBP14.17□□□□□ -0.14
DDX41-212ENST00000511040 LRRN4Q8WUT4 740 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 SERAC1Q96JX3 654 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 BAG1Q99933 345 aaPredicted RBP14.17□□□□□ -0.14
DDX41-212ENST00000511040 RTKNQ9BST9 563 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 CINPQ9BW66 212 aaPredicted RBP14.17□□□□□ -0.14
DDX41-212ENST00000511040 AASDHPPTQ9NRN7 309 aa14.17□□□□□ -0.14
DDX41-212ENST00000511040 TTC24A2A3L6 582 aaPredicted RBP14.16□□□□□ -0.14
DDX41-212ENST00000511040 C16orf96A6NNT2 1141 aa14.16□□□□□ -0.14
DDX41-212ENST00000511040 MUSKO15146 869 aa14.16□□□□□ -0.14
DDX41-212ENST00000511040 SPOPO43791 374 aa14.16□□□□□ -0.14
DDX41-212ENST00000511040 SYPP08247 313 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms