RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	PCSK1N	Q9UHG2	260 aa		10.52	□□□□□ -0.73
PTPN20-222	ENST00000509774	GGA2	Q9UJY4	613 aa		10.52	□□□□□ -0.73
PTPN20-222	ENST00000509774	MMP17	Q9ULZ9	603 aa		10.52	□□□□□ -0.73
PTPN20-222	ENST00000509774	PLA2G4C	Q9UP65	541 aa		10.52	□□□□□ -0.73
PTPN20-222	ENST00000509774	AP4E1	Q9UPM8	1137 aa		10.52	□□□□□ -0.73
PTPN20-222	ENST00000509774	C2CD3	Q4AC94	2353 aa		10.52	□□□□□ -0.73
PTPN20-222	ENST00000509774	ZNF487	B1APH4	448 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	KRT86	O43790	486 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	LRIG2	O94898	1065 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	PABPC1	P11940	636 aa	Known RBP	10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	HLA-E	P13747	358 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	POLR2E	P19388	210 aa	Known RBP	10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	HLA-F	P30511	346 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	OR1E1	P30953	314 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	KIR2DL1	P43626	348 aa	Predicted RBP	10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	SGSH	P51688	502 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	YBEY	P58557	167 aa	Predicted RBP	10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	SLC25A11	Q02978	314 aa	Known RBP	10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	LY6D	Q14210	128 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	MESD	Q14696	234 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	PDK2	Q15119	407 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	RAB6C	Q53S08	254 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	C2orf27A	Q580R0	203 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	ARTN	Q5T4W7	220 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	SDE2	Q6IQ49	451 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	C11orf63	Q6NUN7	778 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	MRPL14	Q6P1L8	145 aa	Known RBP	10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	RABEPK	Q7Z6M1	372 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	KIAA1328	Q86T90	577 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	CFAP52	Q8N1V2	620 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	CARNMT1	Q8N4J0	409 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	LZTR1	Q8N653	840 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	FAM71B	Q8TC56	605 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	BHMT	Q93088	406 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	P2RY11	Q96G91	374 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	BTBD6	Q96KE9	485 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	SNRNP25	Q9BV90	132 aa	Known RBP	10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	RAB6C	Q9H0N0	254 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	MAGEH1	Q9H213	219 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	DHX35	Q9H5Z1	703 aa	Known RBP	10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	ABCB8	Q9NUT2	735 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	TMEM248	Q9NWD8	314 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	KCNK4	Q9NYG8	393 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	IL17B	Q9UHF5	180 aa		10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	REXO2	Q9Y3B8	237 aa	Known RBP	10.51	□□□□□ -0.73
PTPN20-222	ENST00000509774	USP9Y	O00507	2555 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	FAM72C	H0Y354	149 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	PLK4	O00444	970 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	RRP8	O43159	456 aa	Known RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	SRPRA	P08240	638 aa	Known RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	DLD	P09622	509 aa	Known RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	CCDC175	P0C221	793 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	RARA	P10276	462 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	TIMP2	P16035	220 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	IL1R2	P27930	398 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	EPHB2	P29323	1055 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	NTSR1	P30989	418 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	ARL4A	P40617	200 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	IL12RB1	P42701	662 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	SEC13	P55735	322 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	CXADR	P78310	365 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	SEMG2	Q02383	582 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	TLE3	Q04726	772 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	ZNF33A	Q06730	810 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	SLC20A2	Q08357	652 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	ENPP2	Q13822	863 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	SMAD1	Q15797	465 aa	Known RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	EOGT	Q5NDL2	527 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	FAM72A	Q5TYM5	149 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	FAM72D	Q6L9T8	149 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	RWDD4	Q6NW29	188 aa	Known RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	ADIPOR2	Q86V24	386 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	NLRP14	Q86W24	1093 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	FAM72B	Q86X60	149 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	RHOT1	Q8IXI2	618 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	SYCE1	Q8N0S2	351 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	TPCN2	Q8NHX9	752 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	SETD7	Q8WTS6	366 aa	Known RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	FOXJ1	Q92949	421 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	MYEOV	Q96EZ4	313 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	FEM1A	Q9BSK4	669 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	LACRT	Q9GZZ8	138 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	TMPRSS4	Q9NRS4	437 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	DDX56	Q9NY93	547 aa	Known RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	THAP10	Q9P2Z0	257 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	ZNF212	Q9UDV6	495 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	CLEC4E	Q9ULY5	219 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	ALG6	Q9Y672	507 aa		10.5	□□□□□ -0.73
PTPN20-222	ENST00000509774	RELN	P78509	3460 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	TP53BP1	Q12888	1972 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	PRRT4	C9JH25	899 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774		H3BM21	787 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774		H3BRJ5	948 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	EEF2K	O00418	725 aa	Known RBP	10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	TRIM24	O15164	1050 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	DAPK3	O43293	454 aa		10.49	□□□□□ -0.73
PTPN20-222	ENST00000509774	CREB3	O43889	395 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms