RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 POLMQ9NP87 494 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 WSB2Q9NYS7 404 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 BCCIPQ9P287 314 aaKnown RBP eCLIP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 GGT7Q9UJ14 662 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 HRH3Q9Y5N1 445 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 DUSP10Q9Y6W6 482 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 CACNA1EQ15878 2313 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 EDDM13A0A1B0GTR0 161 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 A0A1W2PP55 124 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 BCLAF3A2AJT9 711 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 EIF3CLB5ME19 914 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 CBX4O00257 560 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 EEF2KO00418 725 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 NPC1O15118 1278 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 AKR1B10O60218 316 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 FZD6O60353 706 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 BUB1BO60566 1050 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 RAMP2O60895 175 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 NDUFA10O95299 355 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 MPLP40238 635 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 NRLP54845 237 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 ADPRHP54922 357 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 AIF1P55008 147 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 TPI1P60174 286 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 CCZ1BP86790 482 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 CCZ1P86791 482 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 GBE1Q04446 702 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 DHX9Q08211 1270 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 SLC10A2Q12908 348 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 SERINC3Q13530 473 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 SLC12A1Q13621 1099 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 STARD3Q14849 445 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 CYTH1Q15438 398 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 CST6Q15828 149 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 PREPLQ4J6C6 727 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 PPP6R3Q5H9R7 873 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 C6orf118Q5T5N4 469 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 ERMARDQ5T6L9 678 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 ZNF783Q6ZMS7 281 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 DPY19L3Q6ZPD9 716 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 PARS2Q7L3T8 475 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 PGBD5Q8N414 524 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 PLD5Q8N7P1 536 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 ZNF557Q8N988 423 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 OR2I1PQ8NGU4 316 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 UCMAQ8WVF2 138 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 TEKT4Q8WW24 435 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 EXOC4Q96A65 974 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 FUBP1Q96AE4 644 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 SIPA1Q96FS4 1042 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 EXOC2Q96KP1 924 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 HSPA12BQ96MM6 686 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 EIF3CQ99613 913 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 SPON2Q9BUD6 331 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 TM6SF2Q9BZW4 377 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 ARRDC1-AS1Q9H2J1 176 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 MRPL47Q9HD33 250 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 ITM2CQ9NQX7 267 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 PGPEP1Q9NXJ5 209 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 CTTNBP2NLQ9P2B4 639 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 UVRAGQ9P2Y5 699 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 SLC12A6Q9UHW9 1150 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 PPM1HQ9ULR3 514 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 ITM2BQ9Y287 266 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 PAXBP1Q9Y5B6 917 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 ADAMTS9Q9P2N4 1935 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 DOCK9Q9BZ29 2069 aa7.34□□□□□ -1.23
TOPBP1-207ENST00000509162 FRYQ5TBA9 3013 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 ANKRD36A6QL64 1941 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PTPRZ1P23471 2315 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 NCOR2Q9Y618 2525 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 TMEM131Q92545 1883 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 LNP1A1A4G5 178 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 GRID2IPA4D2P6 1211 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 FGF10O15520 208 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 TIMM44O43615 452 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 KDELR3O43731 214 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PRPSAP2O60256 369 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PRAMEF11O60813 436 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 ALDH1A2O94788 518 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PIGNO95427 931 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 ATP5BP06576 529 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 RETP07949 1114 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 BMP2P12643 396 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 ITIH2P19823 946 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 COMTP21964 271 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 MAOBP27338 520 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 CD6P30203 668 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 CNR2P34972 360 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 ARHGAP25P42331 645 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 NOP2P46087 812 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PAPOLAP51003 745 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 CCNHP51946 323 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 HADHBP55084 474 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 RPL6Q02878 288 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 CNTN1Q12860 1018 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 MTA1Q13330 715 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 FGL2Q14314 439 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PIGHQ14442 188 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms