RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 RHOT2Q8IXI1 618 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 FAM174AQ8TBP5 190 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 SERAC1Q96JX3 654 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 ZDHHC6Q9H6R6 413 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 GAREM1Q9H706 876 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 NHEJ1Q9H9Q4 299 aaPredicted RBP20.2■□□□□ 0.82
SFXN1-209ENST00000508290 PDFQ9HBH1 243 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 INTUQ9ULD6 942 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 CHD5Q8TDI0 1954 aa20.2■□□□□ 0.82
SFXN1-209ENST00000508290 CACNA1EQ15878 2313 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 A0A1B0GVT2 93 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 PRAMEF26H0Y7S4 382 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 KRIT1O00522 736 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 YKT6O15498 198 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 ADRB1P08588 477 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 KRT7P08729 469 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 RARAP10276 462 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 ADRB3P13945 408 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 IL1R2P27930 398 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 SUZ12Q15022 739 aaKnown RBP20.19■□□□□ 0.82
SFXN1-209ENST00000508290 HLA-BQ31612 363 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 POM121L1PQ3SYA9 428 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 KCNT1Q5JUK3 1230 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 KIAA1161Q6NSJ0 714 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 TMCO3Q6UWJ1 677 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 POLNQ7Z5Q5 900 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 PIP4P1Q86T03 277 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 OXR1Q8N573 874 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 MFSD2AQ8NA29 543 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 HCAR2Q8TDS4 363 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 HSPH1Q92598 858 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 ARRDC3Q96B67 414 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 MRFAP1L1Q96HT8 127 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 CPEB1Q9BZB8 566 aaKnown RBP20.19■□□□□ 0.82
SFXN1-209ENST00000508290 FSCN3Q9NQT6 498 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 AASDHPPTQ9NRN7 309 aa20.19■□□□□ 0.82
SFXN1-209ENST00000508290 GON4LQ3T8J9 2241 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 TSPAN6O43657 245 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 PAPOLAP51003 745 aaKnown RBP20.18■□□□□ 0.82
SFXN1-209ENST00000508290 ADKP55263 362 aaKnown RBP20.18■□□□□ 0.82
SFXN1-209ENST00000508290 TAS2R38P59533 333 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 PPP2CBP62714 309 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 PPP2CAP67775 309 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 IL10RBQ08334 325 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 KRT81Q14533 505 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 KIF19Q2TAC6 998 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 SMTNL2Q2TAL5 461 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 PSAPL1Q6NUJ1 521 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 HORMAD1Q86X24 394 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 LRRC49Q8IUZ0 686 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 MAP7D3Q8IWC1 876 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 FAM71BQ8TC56 605 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 SLC6A18Q96N87 628 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 ZNF599Q96NL3 588 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 CSPG4P5Q96PW8 444 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 SLC39A8Q9C0K1 460 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 KLC2Q9H0B6 622 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 SP110Q9HB58 689 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 DKK3Q9UBP4 350 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 LAMA1P25391 3075 aa20.18■□□□□ 0.82
SFXN1-209ENST00000508290 PI4KAP42356 2102 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 MED19A0JLT2 244 aaPredicted RBP20.17■□□□□ 0.82
SFXN1-209ENST00000508290 ARHGAP25P42331 645 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 CTSKP43235 329 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 SSR1P43307 286 aaKnown RBP20.17■□□□□ 0.82
SFXN1-209ENST00000508290 CSNK1DP48730 415 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 RPS21P63220 83 aaKnown RBP20.17■□□□□ 0.82
SFXN1-209ENST00000508290 BNC1Q01954 994 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 STAT4Q14765 748 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 PDK2Q15119 407 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 ZNF423Q2M1K9 1284 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 INAVAQ3KP66 663 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 GDPD4Q6W3E5 623 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 ARHGAP12Q8IWW6 846 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 FEM1CQ96JP0 617 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 TUBGCP5Q96RT8 1024 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 PCDH18Q9HCL0 1135 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 LUC7LQ9NQ29 371 aaKnown RBP20.17■□□□□ 0.82
SFXN1-209ENST00000508290 GDF3Q9NR23 364 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 TM7SF3Q9NS93 570 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 SNX11Q9Y5W9 270 aa20.17■□□□□ 0.82
SFXN1-209ENST00000508290 A0A1W2PQU0 124 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 C16orf96A6NNT2 1141 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 PLK4O00444 970 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 FLRT2O43155 660 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 PCDHGA12O60330 932 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 MTA2O94776 668 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 PCDH8O95206 1070 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 CD59P13987 128 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 AKT2P31751 481 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 HSPA9P38646 679 aaKnown RBP20.16■□□□□ 0.82
SFXN1-209ENST00000508290 CCT8P50990 548 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 RENBPP51606 427 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 NSUN2Q08J23 767 aaKnown RBP eCLIP20.16■□□□□ 0.82
SFXN1-209ENST00000508290 TCEAL1Q15170 157 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 PARS2Q7L3T8 475 aaKnown RBP20.16■□□□□ 0.82
SFXN1-209ENST00000508290 ASB12Q8WXK4 309 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 TSC1Q92574 1164 aa20.16■□□□□ 0.82
SFXN1-209ENST00000508290 CELF6Q96J87 481 aaKnown RBP20.16■□□□□ 0.82
SFXN1-209ENST00000508290 BTBD6Q96KE9 485 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms