RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 CYTH1Q15438 398 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 MYLK3Q32MK0 819 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 AASDHQ4L235 1098 aaPredicted RBP20.17■□□□□ 0.82
DDR1-259ENST00000507046 AGBL4Q5VU57 503 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 KIAA0895LQ68EN5 471 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 NCEH1Q6PIU2 408 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 TP53INP2Q8IXH6 220 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 DNASE2BQ8WZ79 361 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 ARRDC3Q96B67 414 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 RNF157Q96PX1 679 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 LACRTQ9GZZ8 138 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 KDM4CQ9H3R0 1056 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 SMOC1Q9H4F8 434 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 TMEM74BQ9NUR3 256 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 SALL4Q9UJQ4 1053 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 TPX2Q9ULW0 747 aaKnown RBP20.17■□□□□ 0.82
DDR1-259ENST00000507046 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.17■□□□□ 0.82
DDR1-259ENST00000507046 RALGAPA1Q6GYQ0 2036 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 SDK1Q7Z5N4 2213 aa20.17■□□□□ 0.82
DDR1-259ENST00000507046 ARHGAP6O43182 974 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 NEK3P51956 506 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 LBRQ14739 615 aaKnown RBP20.16■□□□□ 0.82
DDR1-259ENST00000507046 GRM3Q14832 879 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 SF3A2Q15428 464 aaKnown RBP20.16■□□□□ 0.82
DDR1-259ENST00000507046 DUOXA1Q1HG43 343 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 TRIM61Q5EBN2 209 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 ERN2Q76MJ5 926 aaKnown RBP20.16■□□□□ 0.82
DDR1-259ENST00000507046 BBS5Q8N3I7 341 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 EXOC2Q96KP1 924 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 ZNF830Q96NB3 372 aaPredicted RBP20.16■□□□□ 0.82
DDR1-259ENST00000507046 NUSAP1Q9BXS6 441 aaKnown RBP20.16■□□□□ 0.82
DDR1-259ENST00000507046 HDAC8Q9BY41 377 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 MIR1-1HGQ9H1L0 117 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 SEPT3Q9UH03 358 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 EVLQ9UI08 416 aaPredicted RBP20.16■□□□□ 0.82
DDR1-259ENST00000507046 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.16■□□□□ 0.82
DDR1-259ENST00000507046 DUSP10Q9Y6W6 482 aa20.16■□□□□ 0.82
DDR1-259ENST00000507046 RIF1Q5UIP0 2472 aaKnown RBP20.16■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3DA0A087WVF3 549 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3IA0A087WXS9 549 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3EA0A087X179 549 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3KA0A087X1G2 549 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3FA6NER0 549 aaPredicted RBP20.15■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3LB9A6J9 549 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 APOL1O14791 398 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 MAFKO60675 156 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 CFIP05156 583 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 UGT2B4P06133 528 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3HP0C7X1 549 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 MAOBP27338 520 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 RENBPP51606 427 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 GALNT2Q10471 571 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 ZNF235Q14590 738 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 PIP5KL1Q5T9C9 394 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3GQ6DHY5 549 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3CQ6IPX1 549 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TCEAL6Q6IPX3 200 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 RFX6Q8HWS3 928 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TBC1D3Q8IZP1 549 aaPredicted RBP20.15■□□□□ 0.82
DDR1-259ENST00000507046 PQLC3Q8N755 202 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 TCEAL3Q969E4 200 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 RNF25Q96BH1 459 aaPredicted RBP20.15■□□□□ 0.82
DDR1-259ENST00000507046 BIRC7Q96CA5 298 aa20.15■□□□□ 0.82
DDR1-259ENST00000507046 EIF2B4Q9UI10 523 aaKnown RBP20.15■□□□□ 0.82
DDR1-259ENST00000507046 EP300Q09472 2414 aaPredicted RBP20.15■□□□□ 0.82
DDR1-259ENST00000507046 MACROD2A1Z1Q3 448 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 C3orf70A6NLC5 250 aaPredicted RBP20.14■□□□□ 0.81
DDR1-259ENST00000507046 PRR5-ARHGAP8B1AHC4 643 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 PATE3B3GLJ2 98 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 ZFXP17010 805 aaPredicted RBP20.14■□□□□ 0.81
DDR1-259ENST00000507046 MX2P20592 715 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 GKP32189 559 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 HSPA9P38646 679 aaKnown RBP20.14■□□□□ 0.81
DDR1-259ENST00000507046 GARSP41250 739 aaKnown RBP20.14■□□□□ 0.81
DDR1-259ENST00000507046 CCR5P51681 352 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 ARHGAP8P85298 464 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 ZNF805Q5CZA5 627 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 TIGD7Q6NT04 549 aaPredicted RBP20.14■□□□□ 0.81
DDR1-259ENST00000507046 FBXL19Q6PCT2 694 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 SLC23A3Q6PIS1 610 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 GDPD4Q6W3E5 623 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 KATNAL2Q8IYT4 538 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 ZCCHC9Q8N567 271 aaKnown RBP20.14■□□□□ 0.81
DDR1-259ENST00000507046 TSEN2Q8NCE0 465 aaKnown RBP20.14■□□□□ 0.81
DDR1-259ENST00000507046 KIAA1524Q8TCG1 905 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 CPEB1Q9BZB8 566 aaKnown RBP20.14■□□□□ 0.81
DDR1-259ENST00000507046 TSGA10Q9BZW7 698 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 PREBQ9HCU5 417 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 NUMA1Q14980 2115 aa20.14■□□□□ 0.81
DDR1-259ENST00000507046 A0A1B0GTW7 788 aa20.13■□□□□ 0.81
DDR1-259ENST00000507046 RNF103O00237 685 aa20.13■□□□□ 0.81
DDR1-259ENST00000507046 IGHV4-34P06331 123 aa20.13■□□□□ 0.81
DDR1-259ENST00000507046 SERPINF2P08697 491 aa20.13■□□□□ 0.81
DDR1-259ENST00000507046 ADRB3P13945 408 aa20.13■□□□□ 0.81
DDR1-259ENST00000507046 CD27P26842 260 aa20.13■□□□□ 0.81
DDR1-259ENST00000507046 MAPK8P45983 427 aa20.13■□□□□ 0.81
DDR1-259ENST00000507046 CSNK1DP48730 415 aa20.13■□□□□ 0.81
DDR1-259ENST00000507046 SLC9A4Q6AI14 798 aa20.13■□□□□ 0.81
DDR1-259ENST00000507046 PARS2Q7L3T8 475 aaKnown RBP20.13■□□□□ 0.81
DDR1-259ENST00000507046 CCDC50Q8IVM0 306 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms