RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 HTR3CQ8WXA8 447 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CASKIN2Q8WXE0 1202 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TRIM44Q96DX7 344 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 OXNAD1Q96HP4 312 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 EXOC2Q96KP1 924 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 MRGPRX1Q96LB2 322 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TRIB3Q96RU7 358 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TMEM121Q9BTD3 319 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 IER2Q9BTL4 223 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SPON2Q9BUD6 331 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 CEP41Q9BYV8 373 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 BRD8Q9H0E9 1235 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SLC6A17Q9H1V8 727 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TNKS2Q9H2K2 1166 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 SERGEFQ9UGK8 458 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 PCYOX1Q9UHG3 505 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 FBXL21Q9UKT6 434 aa5.02□□□□□ -1.61
LMNB1-208ENST00000504788 DRG1Q9Y295 367 aaKnown RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 TP53BP1Q12888 1972 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-208ENST00000504788 PLXNB3Q9ULL4 1909 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 TRPM6Q9BX84 2022 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 TARSL2A2RTX5 802 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 FAM86C2PA6NEL3 165 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 PRR33A8MZF0 331 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 PGRMC1O00264 195 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ALOX15BO15296 676 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ZBTB24O43167 697 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 GCATO75600 419 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 METTL18O95568 372 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 KLF8O95600 359 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 GSRP00390 522 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 JCHAINP01591 159 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 TUBB4AP04350 444 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 PDHA1P08559 390 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ETS1P14921 441 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 GM2AP17900 193 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 NDUFV2P19404 249 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 MX2P20592 715 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 AVPR2P30518 371 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ADRA1AP35348 466 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 WASP42768 502 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 CCNHP51946 323 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 TAS2R38P59533 333 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 EIF3EP60228 445 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 MAXP61244 160 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 RPS14P62263 151 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 SKOR1P84550 965 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 DMWDQ09019 674 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 TRAF2Q12933 501 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 BYSLQ13895 437 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ELAVL3Q14576 367 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 PDK1Q15118 436 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 CDKN3Q16667 212 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 PREPLQ4J6C6 727 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ANKRD20A2Q5SQ80 823 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ATXN7L2Q5T6C5 722 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 SEL1L2Q5TEA6 688 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ANKRD20A1Q5TYW2 823 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ANKRD20A3Q5VUR7 823 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 DENND5AQ6IQ26 1287 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 KDELC1Q6UW63 502 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 SERPINA13PQ6UXR4 307 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 METTL3Q86U44 580 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 CHPFQ8IZ52 775 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 STK40Q8N2I9 435 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ATPAF2Q8N5M1 289 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 PCDH20Q8N6Y1 951 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ATP11CQ8NB49 1132 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 TTC13Q8NBP0 860 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 SPATA4Q8NEY3 305 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 MDGA1Q8NFP4 955 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 TFB1MQ8WVM0 346 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 FUBP1Q96AE4 644 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 EID2BQ96D98 161 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 IMP4Q96G21 291 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 NUDCD1Q96RS6 583 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 ORAI3Q9BRQ5 295 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 MLPHQ9BV36 600 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 AP1M1Q9BXS5 423 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 FRMD8P1Q9BZ68 369 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 CPEB1Q9BZB8 566 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 DDX47Q9H0S4 455 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 NOD2Q9HC29 1040 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 USP36Q9P275 1121 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 RNF14Q9UBS8 474 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 UBA2Q9UBT2 640 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 CDC23Q9UJX2 597 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 MRPS17Q9Y2R5 130 aaKnown RBP5.01□□□□□ -1.61
LMNB1-208ENST00000504788 PPIL1Q9Y3C6 166 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 DMXL1Q9Y485 3027 aa5.01□□□□□ -1.61
LMNB1-208ENST00000504788 CACNA1EQ15878 2313 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 GPR179Q6PRD1 2367 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 CCDC163A0A0D9SF12 145 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 EDDM13A0A1B0GTR0 161 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 LOC285095A0A1B0GVY8 99 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 PPP1R12AO14974 1030 aaPredicted RBP5□□□□□ -1.61
LMNB1-208ENST00000504788 AREL1O15033 823 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 PHF2O75151 1096 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 LEFTY1O75610 366 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 MT-CYBP00156 380 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms