RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 POLD3Q15054 466 aaPredicted RBP23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 SMAD1Q15797 465 aaKnown RBP23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 ZNF542PQ5EBM4 170 aa23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 NEK5Q6P3R8 708 aa23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 SLC25A45Q8N413 288 aa23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 HMCESQ96FZ2 354 aa23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 PPP1R16AQ96I34 528 aa23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 NAP1L5Q96NT1 182 aaPredicted RBP23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 CALN1Q9BXU9 219 aa23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 TRIM7Q9C029 511 aa23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 MAGEH1Q9H213 219 aa23.04■■□□□ 1.28
CDC42SE2-207ENST00000504701 POM121BA6NF01 834 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 KRIT1O00522 736 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 TRIM38O00635 465 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 YKT6O15498 198 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 TMCC1O94876 653 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 UGT2B4P06133 528 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 ITIH2P19823 946 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 EPHB2P29323 1055 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 EFHC2Q5JST6 749 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 CAVIN1Q6NZI2 390 aaKnown RBP23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 FBXL19Q6PCT2 694 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 ZNF354CQ86Y25 554 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 RTL3Q8N8U3 475 aaKnown RBP23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 TSC1Q92574 1164 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 BMFQ96LC9 184 aa23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 CCDC86Q9H6F5 360 aaKnown RBP23.03■■□□□ 1.28
CDC42SE2-207ENST00000504701 TRABD2BA6NFA1 517 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 C16orf96A6NNT2 1141 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 BUB1O43683 1085 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 KDELR3O43731 214 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 PAK4O96013 591 aaPredicted RBP23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 AKT2P31751 481 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 OVGP1Q12889 678 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 CA9Q16790 459 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 TPRG1LQ5T0D9 272 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 OXR1Q8N573 874 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 ARFGAP1Q8N6T3 406 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 OR2AP1Q8NGE2 309 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 ISG20Q96AZ6 181 aaKnown RBP23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 PEBP4Q96S96 227 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 CNPY3Q9BT09 278 aa23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 DSPP15924 2871 aaKnown RBP23.02■■□□□ 1.28
CDC42SE2-207ENST00000504701 IGLON5A6NGN9 336 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 INSIG1O15503 277 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 RFPL3O75679 317 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 MYF5P13349 255 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 TNFAIP3P21580 790 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 ETFBP38117 255 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 MAMLD1Q13495 774 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 DCUN1D2Q6PH85 259 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 ZNF571Q7Z3V5 609 aaPredicted RBP23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 PTAR1Q7Z6K3 402 aaPredicted RBP23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 ABI3BPQ7Z7G0 1075 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 EXOC2Q96KP1 924 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 KLHL32Q96NJ5 620 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 SLC17A9Q9BYT1 436 aa23.01■■□□□ 1.27
CDC42SE2-207ENST00000504701 LRRK1Q38SD2 2015 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 RASA4BC9J798 803 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 FFAR2O15552 330 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 RASA4O43374 803 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 SIGLEC6O43699 453 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 MAGEC1O60732 1142 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 GSRP00390 522 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 GIMD1P0DJR0 217 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 DGKAP23743 735 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 CYP4F3Q08477 520 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 CCDC15Q0P6D6 951 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 MYLK3Q32MK0 819 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 ZNF805Q5CZA5 627 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 C19orf48Q6RUI8 117 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 Q6ZSR6 202 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 TMC6Q7Z403 805 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 GALNT15Q8N3T1 639 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 KLF6Q99612 283 aaPredicted RBP23■■□□□ 1.27
CDC42SE2-207ENST00000504701 BPIFA3Q9BQP9 254 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 FUCA2Q9BTY2 467 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 HAUS4Q9H6D7 363 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 HPCAL4Q9UM19 191 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 RAXQ9Y2V3 346 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 ADAMTS20P59510 1910 aa23■■□□□ 1.27
CDC42SE2-207ENST00000504701 SNRPD1P62314 119 aaKnown RBP22.99■■□□□ 1.27
CDC42SE2-207ENST00000504701 RPS21P63220 83 aaKnown RBP22.99■■□□□ 1.27
CDC42SE2-207ENST00000504701 ASIC2Q16515 512 aa22.99■■□□□ 1.27
CDC42SE2-207ENST00000504701 PROX2Q3B8N5 592 aa22.99■■□□□ 1.27
CDC42SE2-207ENST00000504701 KIAA1161Q6NSJ0 714 aa22.99■■□□□ 1.27
CDC42SE2-207ENST00000504701 PLPP6Q8IY26 295 aa22.99■■□□□ 1.27
CDC42SE2-207ENST00000504701 CELF6Q96J87 481 aaKnown RBP22.99■■□□□ 1.27
CDC42SE2-207ENST00000504701 KLHL11Q9NVR0 708 aa22.99■■□□□ 1.27
CDC42SE2-207ENST00000504701 LHX3Q9UBR4 397 aa22.99■■□□□ 1.27
CDC42SE2-207ENST00000504701 APC2O95996 2303 aa22.98■■□□□ 1.27
CDC42SE2-207ENST00000504701 A6NNZ2 444 aa22.98■■□□□ 1.27
CDC42SE2-207ENST00000504701 DDX3XO00571 662 aaKnown RBP eCLIP22.98■■□□□ 1.279e-7■■■■□ 21.7
CDC42SE2-207ENST00000504701 AP1G1O43747 822 aa22.98■■□□□ 1.27
CDC42SE2-207ENST00000504701 PIAS2O75928 621 aa22.98■■□□□ 1.27
CDC42SE2-207ENST00000504701 SKILP12757 684 aa22.98■■□□□ 1.27
CDC42SE2-207ENST00000504701 PSMA2P25787 234 aa22.98■■□□□ 1.27
CDC42SE2-207ENST00000504701 SERINC3Q13530 473 aa22.98■■□□□ 1.27
CDC42SE2-207ENST00000504701 IQCB1Q15051 598 aa22.98■■□□□ 1.27
CDC42SE2-207ENST00000504701 CYTH1Q15438 398 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms