RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ARSIQ5FYB1 569 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 SRLQ86TD4 932 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 PRUNE1Q86TP1 453 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 TMPRSS6Q8IU80 811 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 CDKL3Q8IVW4 592 aaPredicted RBP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 TEX26Q8N6G2 289 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 PRELID2Q8N945 189 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 MDGA1Q8NFP4 955 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 OR2AP1Q8NGE2 309 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 SLC35B2Q8TB61 432 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 CASKIN2Q8WXE0 1202 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 OR8D1Q8WZ84 308 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 ISG20Q96AZ6 181 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 AGAP3Q96P47 875 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 IL12RB2Q99665 862 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 IER2Q9BTL4 223 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 BCCIPQ9P287 314 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 SARDHQ9UL12 918 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 INVSQ9Y283 1065 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 WASF2Q9Y6W5 498 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 CFAP54Q96N23 3096 aa13.46□□□□□ -0.25
PDLIM7-212ENST00000504380 CXorf51AA0A1B0GTR3 108 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 PGRMC1O00264 195 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 PDE2AO00408 941 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 KCNN4O15554 427 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 ZBTB24O43167 697 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 NEBLO76041 1014 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 PIGNO95427 931 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 APBB3O95704 486 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 IGSF6O95976 241 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 IL1BP01584 269 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 PRLRP16471 622 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 KCNJ1P48048 391 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 FNTBP49356 437 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 SCNN1BP51168 640 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 RENBPP51606 427 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 IFI35P80217 286 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 NIPAL4Q0D2K0 466 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 IHHQ14623 411 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 CREG2Q8IUH2 290 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 FAM71DQ8N9W8 422 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 PIP4K2CQ8TBX8 421 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 ACTRT1Q8TDG2 376 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 HTR3CQ8WXA8 447 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 RLN3Q8WXF3 142 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 VOPP1Q96AW1 172 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 MRGPRX1Q96LB2 322 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 GDAP1L1Q96MZ0 367 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 PSKH2Q96QS6 385 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 HEPHQ9BQS7 1158 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 TMEM121Q9BTD3 319 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 BRD8Q9H0E9 1235 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 RSPH9Q9H1X1 276 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 USP29Q9HBJ7 922 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 PRMT8Q9NR22 394 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 EBF1Q9UH73 591 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 IL36AQ9UHA7 158 aa13.45□□□□□ -0.26
PDLIM7-212ENST00000504380 BCLAF3A2AJT9 711 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 CES2O00748 559 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 MID1O15344 667 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 LEFTY1O75610 366 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 ALDH1A2O94788 518 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 TDGF1P13385 188 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 ETS1P14921 441 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 SLC8A1P32418 973 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 CD68P34810 354 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 GDF10P55107 478 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 ELAVL3Q14576 367 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 ANGPT1Q15389 498 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 TEX44Q53QW1 395 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 ZNF776Q68DI1 518 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 MAMSTRQ6ZN01 415 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 PID1Q7Z2X4 250 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 METTL3Q86U44 580 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 ZNF567Q8N184 647 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 BBS5Q8N3I7 341 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 TAB3Q8N5C8 712 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 FRMD1Q8N878 549 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 MAIP1Q8WWC4 291 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 PRCCQ92733 491 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 FATE1Q969F0 183 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 ARRDC3Q96B67 414 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 SIPA1Q96FS4 1042 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 CCDC114Q96M63 670 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 SEMA3CQ99985 751 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 MGME1Q9BQP7 344 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 IRF2BPLQ9H1B7 796 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 NOD2Q9HC29 1040 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 SCUBE2Q9NQ36 999 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 KLHL8Q9P2G9 620 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 PPM1HQ9ULR3 514 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 TTC7AQ9ULT0 858 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 ZNF148Q9UQR1 794 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 ATP8A1Q9Y2Q0 1164 aa13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-212ENST00000504380 KPNA3O00505 521 aaPredicted RBP13.43□□□□□ -0.26
PDLIM7-212ENST00000504380 GFRA3O60609 400 aa13.43□□□□□ -0.26
PDLIM7-212ENST00000504380 RNASEH1O60930 286 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-212ENST00000504380 URI1O94763 535 aaPredicted RBP13.43□□□□□ -0.26
PDLIM7-212ENST00000504380 PAPSS2O95340 614 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms