RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 WASHC5Q12768 1159 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 BYSLQ13895 437 aaKnown RBP12.07□□□□□ -0.48
CUX1-210ENST00000497815 ELAVL3Q14576 367 aaKnown RBP12.07□□□□□ -0.48
CUX1-210ENST00000497815 CCNG2Q16589 344 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 MYLK3Q32MK0 819 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 TMPRSS6Q8IU80 811 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 CREG2Q8IUH2 290 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 C1orf210Q8IVY1 113 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 TEX26Q8N6G2 289 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 PRELID2Q8N945 189 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 FAM71DQ8N9W8 422 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 OR2T3Q8NH03 318 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 IL12RB2Q99665 862 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 FERMT1Q9BQL6 677 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 HEPHQ9BQS7 1158 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 LRFN3Q9BTN0 628 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 FRMD8P1Q9BZ68 369 aaPredicted RBP12.07□□□□□ -0.48
CUX1-210ENST00000497815 TPSD1Q9BZJ3 242 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 RSPH9Q9H1X1 276 aaPredicted RBP12.07□□□□□ -0.48
CUX1-210ENST00000497815 CD248Q9HCU0 757 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 KLHL8Q9P2G9 620 aaPredicted RBP12.07□□□□□ -0.48
CUX1-210ENST00000497815 IL36AQ9UHA7 158 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 ZNF148Q9UQR1 794 aa12.07□□□□□ -0.48
CUX1-210ENST00000497815 TTC28Q96AY4 2481 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 GOLGA6L10A0A0M3HER8 536 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 K7ESF4 209 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 PDE2AO00408 941 aaPredicted RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 KPNA3O00505 521 aaPredicted RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 MTSS1O43312 755 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 LEFTY1O75610 366 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 STK10O94804 968 aaKnown RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 PIGNO95427 931 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 TUBB4AP04350 444 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 CTSLP07711 333 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 PAFAH1B1P43034 410 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 KCNJ1P48048 391 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 METAP1P53582 386 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 GDF10P55107 478 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 RPS14P62263 151 aaKnown RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 DSC2Q02487 901 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 DMWDQ09019 674 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 KCTD19Q17RG1 926 aaPredicted RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 TEX44Q53QW1 395 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 ZNF776Q68DI1 518 aaPredicted RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 PID1Q7Z2X4 250 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 DSG4Q86SJ6 1040 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 SRLQ86TD4 932 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 ZNF567Q8N184 647 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 PAF1Q8N7H5 531 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 CNTD1Q8N815 330 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 MDGA1Q8NFP4 955 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 PIP4K2CQ8TBX8 421 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 CCDC110Q8TBZ0 833 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 GANCQ8TET4 914 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 PRCCQ92733 491 aaPredicted RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 NKD2Q969F2 451 aaPredicted RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 MAGOHBQ96A72 148 aaKnown RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 SIPA1Q96FS4 1042 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 MRGPRX1Q96LB2 322 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 SEMA3CQ99985 751 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 MGME1Q9BQP7 344 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 POLR1EQ9GZS1 481 aaKnown RBP12.06□□□□□ -0.48
CUX1-210ENST00000497815 USP29Q9HBJ7 922 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 NOD2Q9HC29 1040 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 HOMER3Q9NSC5 361 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 HAUS2Q9NVX0 235 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 SARDHQ9UL12 918 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 ATP8A1Q9Y2Q0 1164 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 WASF2Q9Y6W5 498 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 NUP205Q92621 2012 aa12.06□□□□□ -0.48
CUX1-210ENST00000497815 ESPNB1AK53 854 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 C1QTNF3-AMACRE9PGA6 284 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 PLK4O00444 970 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 ALOX15BO15296 676 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 MID1O15344 667 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 POP4O95707 220 aaKnown RBP12.05□□□□□ -0.48
CUX1-210ENST00000497815 IFNB1P01574 187 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 DNTTP04053 509 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 PRNPP04156 253 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 UGT2B4P06133 528 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 ACADMP11310 421 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 NFKB1P19838 968 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 SLC8A1P32418 973 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 HSPA9P38646 679 aaKnown RBP12.05□□□□□ -0.48
CUX1-210ENST00000497815 AP1S1P61966 158 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 RAD51Q06609 339 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 NSUN2Q08J23 767 aaKnown RBP eCLIP12.05□□□□□ -0.48
CUX1-210ENST00000497815 NIPAL4Q0D2K0 466 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 OASLQ15646 514 aaKnown RBP12.05□□□□□ -0.48
CUX1-210ENST00000497815 CST6Q15828 149 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 TTC27Q6P3X3 843 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 GSTA5Q7RTV2 222 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 PRUNE1Q86TP1 453 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 CAMK1DQ8IU85 385 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 PLPP6Q8IY26 295 aa12.05□□□□□ -0.48
CUX1-210ENST00000497815 MAML2Q8IZL2 1156 aaPredicted RBP12.05□□□□□ -0.48
CUX1-210ENST00000497815 TAB3Q8N5C8 712 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms