RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CCDC114Q96M63 670 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 FAM118BQ9BPY3 351 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 EPC1Q9H2F5 836 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 MTG2Q9H4K7 406 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 SPATA6Q9NWH7 488 aaPredicted RBP20.36■□□□□ 0.85
CTSD-206ENST00000497544 SEPT3Q9UH03 358 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 PCDHGA2Q9Y5H1 932 aa20.36■□□□□ 0.85
CTSD-206ENST00000497544 CNOT1A5YKK6 2376 aaKnown RBP20.36■□□□□ 0.85
CTSD-206ENST00000497544 PGRMC1O00264 195 aaKnown RBP20.35■□□□□ 0.85
CTSD-206ENST00000497544 CXCL12P48061 93 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 SNRPD1P62314 119 aaKnown RBP20.35■□□□□ 0.85
CTSD-206ENST00000497544 SLC10A7Q0GE19 358 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 ZNF235Q14590 738 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 SLC45A4Q5BKX6 768 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 CDKL3Q8IVW4 592 aaPredicted RBP20.35■□□□□ 0.85
CTSD-206ENST00000497544 NETO1Q8TDF5 533 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 TM6SF2Q9BZW4 377 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 TNKS2Q9H2K2 1166 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 POLMQ9NP87 494 aaPredicted RBP20.35■□□□□ 0.85
CTSD-206ENST00000497544 PRSS16Q9NQE7 514 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 HOMER3Q9NSC5 361 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 HAUS2Q9NVX0 235 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 POLR3BQ9NW08 1133 aaPredicted RBP20.35■□□□□ 0.85
CTSD-206ENST00000497544 RBM22Q9NW64 420 aaKnown RBP eCLIP20.35■□□□□ 0.85
CTSD-206ENST00000497544 SEPT10Q9P0V9 454 aa20.35■□□□□ 0.85
CTSD-206ENST00000497544 R3HDM2Q9Y2K5 976 aaKnown RBP20.35■□□□□ 0.85
CTSD-206ENST00000497544 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.35■□□□□ 0.85
CTSD-206ENST00000497544 KCNK1O00180 336 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 FANCGO15287 622 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 MTSS1O43312 755 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 SIN3BO75182 1162 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 PEX11BO96011 259 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 JCHAINP01591 159 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 PROS1P07225 676 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 VAV1P15498 845 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 PAFAH1B1P43034 410 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 MMP13P45452 471 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 CCR3P51677 355 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 DGKEP52429 567 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 PRKD1Q15139 912 aaPredicted RBP20.34■□□□□ 0.85
CTSD-206ENST00000497544 CARD16Q5EG05 197 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 C9orf64Q5T6V5 341 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 HEATR6Q6AI08 1181 aaKnown RBP20.34■□□□□ 0.85
CTSD-206ENST00000497544 MAMSTRQ6ZN01 415 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 Q6ZVU0 165 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 PLPP6Q8IY26 295 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 RYBPQ8N488 228 aaPredicted RBP20.34■□□□□ 0.85
CTSD-206ENST00000497544 C1orf54Q8WWF1 131 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 MAML1Q92585 1016 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 ERLEC1Q96DZ1 483 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 CAPZA3Q96KX2 299 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 QKIQ96PU8 341 aaKnown RBP eCLIP20.34■□□□□ 0.85
CTSD-206ENST00000497544 RNF14Q9UBS8 474 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 FBXO4Q9UKT5 387 aa20.34■□□□□ 0.85
CTSD-206ENST00000497544 GCN1Q92616 2671 aaKnown RBP20.34■□□□□ 0.85
CTSD-206ENST00000497544 CKAP5Q14008 2032 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 ZNF189O75820 626 aaPredicted RBP20.33■□□□□ 0.85
CTSD-206ENST00000497544 KCNA4P22459 653 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 RBL1P28749 1068 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 HSPA9P38646 679 aaKnown RBP20.33■□□□□ 0.85
CTSD-206ENST00000497544 SHC2P98077 582 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 CAMK2GQ13555 558 aaPredicted RBP20.33■□□□□ 0.85
CTSD-206ENST00000497544 SNX1Q13596 522 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 CCNG2Q16589 344 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 KIAA1211LQ6NV74 962 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 TMEM92Q6UXU6 159 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 STK40Q8N2I9 435 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 TSEN2Q8NCE0 465 aaKnown RBP20.33■□□□□ 0.85
CTSD-206ENST00000497544 ZBTB44Q8NCP5 570 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 OR2AP1Q8NGE2 309 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 SLC35B2Q8TB61 432 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 HTR3CQ8WXA8 447 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 ATG4AQ8WYN0 398 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 PSKH2Q96QS6 385 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 FBRSQ9HAH7 460 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 HECAQ9UBI9 543 aaPredicted RBP20.33■□□□□ 0.85
CTSD-206ENST00000497544 DNPEPQ9ULA0 475 aa20.33■□□□□ 0.85
CTSD-206ENST00000497544 A0A1W2PQF6 199 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 BCLAF3A2AJT9 711 aaKnown RBP20.32■□□□□ 0.84
CTSD-206ENST00000497544 LAMTOR5O43504 91 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 RNASEH1O60930 286 aaKnown RBP20.32■□□□□ 0.84
CTSD-206ENST00000497544 LILRB5O75023 590 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 ZNF821O75541 412 aaPredicted RBP20.32■□□□□ 0.84
CTSD-206ENST00000497544 ALDH1A2O94788 518 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 IGSF6O95976 241 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 GSRP00390 522 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 IFI35P80217 286 aaPredicted RBP20.32■□□□□ 0.84
CTSD-206ENST00000497544 SATB1Q01826 763 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 RAD51Q06609 339 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 ITKQ08881 620 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 NSUN2Q08J23 767 aaKnown RBP eCLIP20.32■□□□□ 0.84
CTSD-206ENST00000497544 SIX1Q15475 284 aaPredicted RBP20.32■□□□□ 0.84
CTSD-206ENST00000497544 TEX26Q8N6G2 289 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 TSTD1Q8NFU3 115 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 OR2A12Q8NGT7 310 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 KIF18AQ8NI77 898 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 OR8D1Q8WZ84 308 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 GDAP1L1Q96MZ0 367 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 IL12RB2Q99665 862 aa20.32■□□□□ 0.84
CTSD-206ENST00000497544 AP1M1Q9BXS5 423 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms