RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 ATP5BP06576 529 aaKnown RBP10.05□□□□□ -0.8
SRSF4-205ENST00000497015 GP1BAP07359 652 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 SLC2A3P11169 496 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 UNGP13051 313 aaPredicted RBP10.05□□□□□ -0.8
SRSF4-205ENST00000497015 VAV1P15498 845 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 POLR2EP19388 210 aaKnown RBP10.05□□□□□ -0.8
SRSF4-205ENST00000497015 RBMS1P29558 406 aaKnown RBP10.05□□□□□ -0.8
SRSF4-205ENST00000497015 SLC6A4P31645 630 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 PRKCIP41743 596 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 PDX1P52945 283 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 CENPCQ03188 943 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 EIF4EBP2Q13542 120 aaPredicted RBP10.05□□□□□ -0.8
SRSF4-205ENST00000497015 TRIM14Q14142 442 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 ARID5BQ14865 1188 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 CLCA4Q14CN2 919 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 TBR1Q16650 682 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 POM121L1PQ3SYA9 428 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 PTPN20Q4JDL3 420 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 FSCBQ5H9T9 825 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 RFWD3Q6PCD5 774 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 OLFML1Q6UWY5 402 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 XKR5Q6UX68 686 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.05□□□□□ -0.8
SRSF4-205ENST00000497015 MMS22LQ6ZRQ5 1243 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 IRF2BP2Q7Z5L9 587 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 IQCHQ86VS3 1027 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 PASD1Q8IV76 773 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 STK40Q8N2I9 435 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 ZNF557Q8N988 423 aaPredicted RBP10.05□□□□□ -0.8
SRSF4-205ENST00000497015 CLEC4CQ8WTT0 213 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 PGAP3Q96FM1 320 aaPredicted RBP10.05□□□□□ -0.8
SRSF4-205ENST00000497015 OMDQ99983 421 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 SFMBT1Q9UHJ3 866 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 SARDHQ9UL12 918 aa10.05□□□□□ -0.8
SRSF4-205ENST00000497015 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.05□□□□□ -0.83e-13■■■□□ 15.1
SRSF4-205ENST00000497015 BZW2Q9Y6E2 419 aaKnown RBP10.05□□□□□ -0.8
SRSF4-205ENST00000497015 K7ESM1 405 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 DAB1O75553 588 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 PIAS2O75928 621 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 NEBLO76041 1014 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 TNFSF15O95150 251 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 CALB1P05937 261 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 MMEP08473 750 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 MMP8P22894 467 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 NOS2P35228 1153 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 CSKP41240 450 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 SLC11A2P49281 568 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 DUSP3P51452 185 aaPredicted RBP10.04□□□□□ -0.8
SRSF4-205ENST00000497015 CYP4F2P78329 520 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 ZBED6P86452 979 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 SERINC3Q13530 473 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 SLC45A4Q5BKX6 768 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 ZNF542PQ5EBM4 170 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 MPP7Q5T2T1 576 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 ADGRF1Q5T601 910 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 PIK3R6Q5UE93 754 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 TAF3Q5VWG9 929 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 OR6B2Q6IFH4 312 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 FAM183BPQ6ZVS7 135 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 PHF13Q86YI8 300 aaPredicted RBP10.04□□□□□ -0.8
SRSF4-205ENST00000497015 TMEM145Q8NBT3 493 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 IFI44Q8TCB0 444 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 DQX1Q8TE96 717 aaKnown RBP10.04□□□□□ -0.8
SRSF4-205ENST00000497015 HTR3CQ8WXA8 447 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 EDEM1Q92611 657 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 ARRDC3Q96B67 414 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 SGF29Q96ES7 293 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 SLC39A13Q96H72 371 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 AGPAT1Q99943 283 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 DDX50Q9BQ39 737 aaKnown RBP10.04□□□□□ -0.8
SRSF4-205ENST00000497015 KLHL11Q9NVR0 708 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 IFNKQ9P0W0 207 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 ATXN7L1Q9ULK2 861 aaPredicted RBP10.04□□□□□ -0.8
SRSF4-205ENST00000497015 STAP1Q9ULZ2 295 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 CAPN11Q9UMQ6 739 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 ERVW-1Q9UQF0 538 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 PAXBP1Q9Y5B6 917 aa10.04□□□□□ -0.8
SRSF4-205ENST00000497015 TARSL2A2RTX5 802 aaKnown RBP10.03□□□□□ -0.8
SRSF4-205ENST00000497015 LRRC53A6NM62 1247 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 PIK3R2O00459 728 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 TBL1XO60907 577 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 TRUB2O95900 331 aaKnown RBP10.03□□□□□ -0.8
SRSF4-205ENST00000497015 F9P00740 461 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 ERBB2P04626 1255 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 ITGB2P05107 769 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 THEGLP0DJG4 465 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 GZMAP12544 262 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 CHRNB2P17787 502 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 C5AR1P21730 350 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 NSFP46459 744 aaKnown RBP10.03□□□□□ -0.8
SRSF4-205ENST00000497015 PSMD8P48556 350 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 TBX4P57082 545 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 TAS2R38P59533 333 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 CDK17Q00537 523 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 SFSWAPQ12872 951 aaKnown RBP10.03□□□□□ -0.8
SRSF4-205ENST00000497015 OVGP1Q12889 678 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 STAT4Q14765 748 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 SKIDA1Q1XH10 827 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 CLEC16AQ2KHT3 1053 aa10.03□□□□□ -0.8
SRSF4-205ENST00000497015 PERM1Q5SV97 790 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms