RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 SRLQ86TD4 932 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 C12orf50Q8NA57 414 aaPredicted RBP9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 CDC26Q8NHZ8 85 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 SHKBP1Q8TBC3 707 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 KLHL32Q96NJ5 620 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 DRC3Q9H069 523 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 TCRBV7S2A1N4TA0A589 114 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 CHADO15335 359 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 ABLIM3O94929 683 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 CARD16Q5EG05 197 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 PM20D1Q6GTS8 502 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 STRA8Q7Z7C7 330 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 HDDC3Q8N4P3 179 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 FAM71BQ8TC56 605 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 RTP3Q9BQQ7 232 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 SLC46A2Q9BY10 475 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 PCMTD2Q9NV79 361 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 DTLQ9NZJ0 730 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 CD274Q9NZQ7 290 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 ARHGAP26Q9UNA1 814 aa9.58□□□□□ -0.88
GAPVD1-219ENST00000495955 INSIG1O15503 277 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 GPC4O75487 556 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 HSPA4LO95757 839 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 HOXB2P14652 356 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 FECHP22830 423 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 HTRA4P83105 476 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 SLC25A11Q02978 314 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 KCNMB4Q86W47 210 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 TRAPPC5Q8IUR0 188 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 MMAAQ8IVH4 418 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 ZNF689Q96CS4 500 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 TRMT2BQ96GJ1 504 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 WRAP53Q9BUR4 548 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 ASB8Q9H765 288 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 RXFP1Q9HBX9 757 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 ERVW-1Q9UQF0 538 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 COLQQ9Y215 455 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 DOCK5Q9H7D0 1870 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 ELP6Q0PNE2 266 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 DMC1Q14565 340 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 PCID2Q5JVF3 399 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 RSPO2Q6UXX9 243 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 SUGP1Q8IWZ8 645 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 PEBP4Q96S96 227 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 IL22Q9GZX6 179 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 CSNK1G1Q9HCP0 422 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 OGFRQ9NZT2 677 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 LRRC72A6NJI9 287 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 SUPT3HB4E1H0 165 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 B4GALT3O60512 393 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 SUPT3HO75486 399 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 FSBPO95073 299 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 ZNF7P17097 686 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 SLC29A2Q14542 456 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 PLCL1Q15111 1095 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 ZKSCAN8Q15776 578 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 HSP90AA5PQ58FG0 334 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 PITRM1Q5JRX3 1037 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 ZNF470Q6ECI4 717 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 SMYD5Q6GMV2 418 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 PAQR9Q6ZVX9 377 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 DET1Q7L5Y6 550 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 VN1R2Q8NFZ6 395 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 OR2W6PQ8NHA6 318 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 LINC00597Q9H2U6 94 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 IL36AQ9UHA7 158 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 PDE2AO00408 941 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 AGTP01019 485 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 FGF1P05230 155 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 HLA-EP13747 358 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 HTR1BP28222 390 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 HCAR3P49019 387 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 AP1S1P61966 158 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 TCTN1Q2MV58 587 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 ALFQ53S48 1182 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 ARSIQ5FYB1 569 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 LRRC73Q5JTD7 316 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 NCBP2-AS2Q69YL0 99 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 Q6ZVU0 165 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 FEM1CQ96JP0 617 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 C1orf74Q96LT6 269 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 KCND1Q9NSA2 647 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 GTSE1Q9NYZ3 720 aa9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 DMGDHQ9UI17 866 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 USP15Q9Y4E8 981 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-219ENST00000495955 MAN2B1O00754 1011 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 INPP4BO15327 924 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 SNRPAP09012 282 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 BRAFP15056 766 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 HLA-DPA1P20036 260 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 MAT2AP31153 395 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 MAGOHP61326 146 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 HNRNPDQ14103 355 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 BOP1Q14137 746 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 PON2Q15165 354 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 LRRC6Q86X45 466 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 UBR7Q8N806 425 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 SPATA22Q8NHS9 363 aa9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 UBE2ZQ9H832 354 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-219ENST00000495955 MLXIPLQ9NP71 852 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms