RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 BANF1O75531 89 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 USP1O94782 785 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ALDH1A2O94788 518 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 RHOCP08134 193 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ALADP13716 330 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 MGAT1P26572 445 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 CD68P34810 354 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-214ENST00000495485 AVPR1AP37288 418 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 HADHAP40939 763 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 GNA12Q03113 381 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 MGAT5Q09328 741 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 LBRQ14739 615 aaKnown RBP10.41□□□□□ -0.74
HDAC3-214ENST00000495485 SLC14A2Q15849 920 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 PCID2Q5JVF3 399 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 IL31Q6EBC2 164 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 UNC5AQ6ZN44 842 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 GAREM2Q75VX8 874 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ZNF534Q76KX8 674 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 NLRP9Q7RTR0 991 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 CPLX4Q7Z7G2 160 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 METTL3Q86U44 580 aaKnown RBP10.41□□□□□ -0.74
HDAC3-214ENST00000495485 TAX1BP1Q86VP1 789 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 TEX26Q8N6G2 289 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 PPM1NQ8N819 430 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ZNF557Q8N988 423 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-214ENST00000495485 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
HDAC3-214ENST00000495485 HJURPQ8NCD3 748 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-214ENST00000495485 OR52K1Q8NGK4 314 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 SHKBP1Q8TBC3 707 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 USP33Q8TEY7 942 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ATP2A3Q93084 1043 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 IGSF8Q969P0 613 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ELSPBP1Q96BH3 223 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 HMCESQ96FZ2 354 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ASB16Q96NS5 453 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 POLR1EQ9GZS1 481 aaKnown RBP10.41□□□□□ -0.74
HDAC3-214ENST00000495485 CCDC134Q9H6E4 229 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ZFP14Q9HCL3 533 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 PPANQ9NQ55 473 aaKnown RBP10.41□□□□□ -0.74
HDAC3-214ENST00000495485 EURLQ9NYK6 297 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ZFATQ9P243 1243 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 SEPT3Q9UH03 358 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 STOML2Q9UJZ1 356 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 SORCS3Q9UPU3 1222 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 A0A1W2PRU2 124 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 FAM159BA6NKW6 160 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 C2CD4DB7Z1M9 353 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 H0Y626 953 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 NDUFAB1O14561 156 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 KDELR3O43731 214 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 PRAMEF11O60813 436 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 CNTN5O94779 1100 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 CYBBP04839 570 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 IRF1P10914 325 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 CA4P22748 312 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 ADRA1DP25100 572 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 SLC7A9P82251 487 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 PFKPQ01813 784 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 SPARCL1Q14515 664 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 UGP2Q16851 508 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 SLC5A9Q2M3M2 681 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 MPPE1Q53F39 396 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 ALFQ53S48 1182 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 GRTP1Q5TC63 336 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 HHATQ5VTY9 493 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 PDPK2PQ6A1A2 396 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 NADSYN1Q6IA69 706 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 MARK2Q7KZI7 788 aaKnown RBP10.4□□□□□ -0.74
HDAC3-214ENST00000495485 TP53INP2Q8IXH6 220 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 CMTM8Q8IZV2 173 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 CELF5Q8N6W0 485 aaKnown RBP10.4□□□□□ -0.74
HDAC3-214ENST00000495485 NETO2Q8NC67 525 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 ACMSDQ8TDX5 336 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 DCAKDQ8WVC6 231 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 MRRFQ96E11 262 aaKnown RBP10.4□□□□□ -0.74
HDAC3-214ENST00000495485 TMA16Q96EY4 203 aaKnown RBP10.4□□□□□ -0.74
HDAC3-214ENST00000495485 CHMP6Q96FZ7 201 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 MSANTD3Q96H12 275 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 CABS1Q96KC9 395 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 MRM3Q9HC36 420 aaKnown RBP10.4□□□□□ -0.74
HDAC3-214ENST00000495485 NT5MQ9NPB1 228 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 TRPV5Q9NQA5 729 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 HCFC1R1Q9NWW0 138 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 MOCS1Q9NZB8 636 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 UBA2Q9UBT2 640 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-214ENST00000495485 CTNNAL1Q9UBT7 734 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 AGO1Q9UL18 857 aaKnown RBP10.4□□□□□ -0.74
HDAC3-214ENST00000495485 SOX13Q9UN79 622 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 RPS6KL1Q9Y6S9 549 aa10.4□□□□□ -0.74
HDAC3-214ENST00000495485 NYNRINQ9P2P1 1898 aaKnown RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 KIF26AQ9ULI4 1882 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CXorf51AA0A1B0GTR3 108 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 GOLGA6L7A0A1B0GV03 622 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 HEATR9A2RTY3 570 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 C2orf78A6NCI8 922 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 F5H423 210 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 MOSPD3O75425 235 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 FAM155BO75949 473 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 OLFM2O95897 454 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 FAM107AO95990 144 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms