RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 CCDC25Q86WR0 208 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.68□□□□□ -1.5
SRRM1-218ENST00000494934 UEVLDQ8IX04 471 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 DHX40Q8IX18 779 aaKnown RBP5.68□□□□□ -1.5
SRRM1-218ENST00000494934 C16orf71Q8IYS4 520 aaPredicted RBP5.68□□□□□ -1.5
SRRM1-218ENST00000494934 FAM98AQ8NCA5 519 aaKnown RBP5.68□□□□□ -1.5
SRRM1-218ENST00000494934 ARHGEF2Q92974 986 aaKnown RBP5.68□□□□□ -1.5
SRRM1-218ENST00000494934 CALML4Q96GE6 196 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 TEFMQ96QE5 360 aaKnown RBP5.68□□□□□ -1.5
SRRM1-218ENST00000494934 SLF1Q9BQI6 1058 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 IFT27Q9BW83 186 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 NUF2Q9BZD4 464 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 HIPK3Q9H422 1215 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 MOV10Q9HCE1 1003 aaKnown RBP5.68□□□□□ -1.5
SRRM1-218ENST00000494934 BABAM1Q9NWV8 329 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 NCKIPSDQ9NZQ3 722 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 ABI3Q9P2A4 366 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 SLC17A6Q9P2U8 582 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 A4GNTQ9UNA3 340 aa5.68□□□□□ -1.5
SRRM1-218ENST00000494934 ARHGAP10A1A4S6 786 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 A8MZ25 164 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 BTBD18B2RXH4 712 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 ERAL1O75616 437 aaKnown RBP5.67□□□□□ -1.5
SRRM1-218ENST00000494934 C1QL1O75973 258 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 NFATC1O95644 943 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 IL1AP01583 271 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 KLRC2P26717 231 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 TACR3P29371 465 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 CLDN2P57739 230 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 TAF11Q15544 211 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 EDRF1Q3B7T1 1238 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 SYTL3Q4VX76 610 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 AKNAD1Q5T1N1 836 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 ARMC3Q5W041 872 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 KLHL35Q6PF15 583 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 C17orf53Q8N3J3 647 aaPredicted RBP5.67□□□□□ -1.5
SRRM1-218ENST00000494934 OR4N2Q8NGD1 307 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 NOC3LQ8WTT2 800 aaKnown RBP5.67□□□□□ -1.5
SRRM1-218ENST00000494934 PSPC1Q8WXF1 523 aaKnown RBP5.67□□□□□ -1.5
SRRM1-218ENST00000494934 CMTM3Q96MX0 182 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 PIMREGQ9BSJ6 248 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 MRIQ9BWK5 157 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 EHD2Q9NZN4 543 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 NFKBIL1Q9UBC1 381 aaPredicted RBP5.67□□□□□ -1.5
SRRM1-218ENST00000494934 FBXO40Q9UH90 709 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 SLC8A2Q9UPR5 921 aa5.67□□□□□ -1.5
SRRM1-218ENST00000494934 MST1RQ04912 1400 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 A0A1W2PQ09 198 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 TMEM247A6NEH6 219 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 TAF4O00268 1085 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 BEST1O76090 585 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 ZNF8P17098 575 aaPredicted RBP5.66□□□□□ -1.5
SRRM1-218ENST00000494934 IL11P20809 199 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 GPD1P21695 349 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 PTH2RP49190 550 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 HDAC4P56524 1084 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 TGFB2P61812 414 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 TFF2Q03403 129 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 EPS8Q12929 822 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 GSTA3Q16772 222 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 MFSD4BQ5TF39 518 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 PRAMEF17Q5VTA0 474 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 ATG9BQ674R7 924 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 HIST2H2BCQ6DN03 193 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 HIST2H2BDQ6DRA6 164 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 LRRC8EQ6NSJ5 796 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 CLEC17AQ6ZS10 378 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 TDRPQ86YL5 185 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 CADM3Q8N126 398 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 FAM47BQ8NA70 645 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 CAGE1Q8TC20 777 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 HDAC7Q8WUI4 952 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 KAT2BQ92831 832 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 MAP4K1Q92918 833 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 GTF3C6Q969F1 213 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 MMABQ96EY8 250 aaPredicted RBP5.66□□□□□ -1.5
SRRM1-218ENST00000494934 DUSP26Q9BV47 211 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 FBRSL1Q9HCM7 1045 aaKnown RBP5.66□□□□□ -1.5
SRRM1-218ENST00000494934 SLC6A13Q9NSD5 602 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 ARPP21Q9UBL0 812 aaPredicted RBP5.66□□□□□ -1.5
SRRM1-218ENST00000494934 PLEKHB1Q9UF11 243 aaPredicted RBP5.66□□□□□ -1.5
SRRM1-218ENST00000494934 TLK1Q9UKI8 766 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 PCDHGB5Q9Y5G0 923 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 WNT6Q9Y6F9 365 aa5.66□□□□□ -1.5
SRRM1-218ENST00000494934 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.65□□□□□ -1.5
SRRM1-218ENST00000494934 DDTLA6NHG4 134 aaPredicted RBP5.65□□□□□ -1.5
SRRM1-218ENST00000494934 FAM90A8PA6NJQ4 464 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 C2CD4BA6NLJ0 364 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 NPIPB11E5RHQ5 1161 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 SLC25A17O43808 307 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 FAM90A13PP0C7W8 464 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 FAM90A24PP0C7X0 464 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 CDH2P19022 906 aaPredicted RBP5.65□□□□□ -1.5
SRRM1-218ENST00000494934 MCM3P25205 808 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 GCH1P30793 250 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 DPP6P42658 865 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 PIP4K2AP48426 406 aaPredicted RBP5.65□□□□□ -1.5
SRRM1-218ENST00000494934 F2RL1P55085 397 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 SOX10P56693 466 aa5.65□□□□□ -1.5
SRRM1-218ENST00000494934 GRIK3Q13003 919 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms